RNA id: TCONS_00021604



Basic Information


Item Value
RNA id TCONS_00021604
length 117
RNA type rRNA
GC content 0.49
exon number 1
gene id XLOC_011078
representative True

Chromosome Information


Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 50961246 ~ 50961362 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


TgcaacagccatatcaccctgcatcCCTATACcgtttactcactgaagctaagcagggctgatcctggtcaatacctggatgggagaccacatgagaaaactaggttgctattggga

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000176524

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00022271 lncRNA downstream 1724145 49236408 ~ 49237101 (-) True XLOC_011064
TCONS_00022270 lncRNA downstream 1739153 49215478 ~ 49222093 (-) True XLOC_011063
TCONS_00022269 lncRNA downstream 1776762 49155860 ~ 49184484 (-) True XLOC_011062
TCONS_00022268 lncRNA downstream 2139901 48820350 ~ 48821345 (-) True XLOC_011061
TCONS_00021584 lncRNA downstream 2544483 48415974 ~ 48416763 (-) True XLOC_011058
TCONS_00022272 lncRNA upstream 117305 51078667 ~ 51080430 (-) False XLOC_011080
TCONS_00022273 lncRNA upstream 117553 51078915 ~ 51080430 (-) True XLOC_011080
TCONS_00021841 lncRNA upstream 914009 51875371 ~ 51884294 (-) False XLOC_011088
TCONS_00021842 lncRNA upstream 936394 51897756 ~ 51947869 (-) False XLOC_011089
TCONS_00021843 lncRNA upstream 1565490 52526852 ~ 52540111 (-) False XLOC_011091
TCONS_00021602 mRNA downstream 8980 50926455 ~ 50952266 (-) True XLOC_011076
TCONS_00021601 mRNA downstream 42338 50917913 ~ 50918908 (-) True XLOC_011075
TCONS_00021600 mRNA downstream 63359 50889118 ~ 50897887 (-) True XLOC_011074
TCONS_00021597 mRNA downstream 731972 50214819 ~ 50229274 (-) False XLOC_011072
TCONS_00021598 mRNA downstream 732053 50215587 ~ 50229193 (-) True XLOC_011072
TCONS_00021605 mRNA upstream 40595 51001957 ~ 51072406 (-) True XLOC_011079
TCONS_00021606 mRNA upstream 123110 51084472 ~ 51151993 (-) True XLOC_011081
TCONS_00021607 mRNA upstream 282935 51244297 ~ 51254694 (-) False XLOC_011082
TCONS_00021608 mRNA upstream 283330 51244692 ~ 51253925 (-) True XLOC_011082
TCONS_00021609 mRNA upstream 305140 51266502 ~ 51271962 (-) False XLOC_011083
TCONS_00021603 other downstream 25940 50935190 ~ 50935306 (-) True XLOC_011077
TCONS_00021599 other downstream 322460 50638670 ~ 50638786 (-) True XLOC_011073
TCONS_00021592 other downstream 965652 49995478 ~ 49995594 (-) True XLOC_011068
TCONS_00021580 other downstream 3017989 47943143 ~ 47943257 (-) True XLOC_011054
TCONS_00021533 other downstream 4620589 46340543 ~ 46340657 (-) True XLOC_011031
TCONS_00021614 other upstream 794030 51755392 ~ 51755506 (-) True XLOC_011087
TCONS_00021617 other upstream 980468 51941830 ~ 51947781 (-) True XLOC_011089
TCONS_00021634 other upstream 2681458 53642820 ~ 53649995 (-) True XLOC_011102
TCONS_00021635 other upstream 2689540 53650902 ~ 53655539 (-) True XLOC_011103
TCONS_00021650 other upstream 3804139 54765501 ~ 54767193 (-) True XLOC_011121