RNA id: TCONS_00000186


Basic Information

Item Value
RNA id TCONS_00000186
length 1827
RNA type mRNA
GC content 0.45
exon number 6
gene id XLOC_000095
representative False

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 8521323 ~ 8532009 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTATGAGGTGTTTGTTTTAGGCGAGAGGGCGAGTGCGTACTGGGCAAAAGTATTGAATTTAAAACTATATTCTAATGGCTCCGAAATAAATCTACCTTTTAAAGGCGAGGAGAAGATGGAATTGCTGCTGTAATTGACTTCCTGTTGTCCAATGCACGGCTGGTGCTGGGGGTCGGTGGAGCTGCGGTGCTGGGCATTGCCACATTAGCTGTGAAACGgCTGATAGAGCGGGCCGGCAGACCTCCTGATGAGGAACCTGACAAGAAGATGACGGACAGCTGGGAGGAGTTGAGCCTGGTCAGCGCCTCTCCTAAACTGCTCCACAAGGGGATTGAAGGAGTAGTCATGAAACAGATCGCTGCTGCCACCAAGAAAGcgGAGTTGTCCCAGCCCATCCCGATGCCCTCCTCAGAGCCACAGCGGTGTGATGCagatcctcctcctcctcaaagGCGGAAGCGGATGGATCTGTGTGTGTTGACGTTTGCAGATCGTCTGCAGCAGTACTACAGGACTAGAGTGTGTCTGTCCGCAGAGGAGGTGTGTGTCGCGCAGCAGCGAGCGCTAGACATCGCCACAGAGATCCAGGCCTTCCTGCACTCCAAACACCCCGACATGCCCCTGGGAGACATGACTCTGGCCGGGTCGCTGCTCGATGACCTGCAGGTGGTGACCGCTGACCATGCGTGTCTGATCGTGCCTCTACAGTTGGAGTCGAGTCTGTGGACTCCTATTGCGGGCGAGGATACATTTTTGGGTCACCCTCAGTACTGCATGGTGCGGCGGGAAAACCTTGAGTACTTTCCGAGGGGACGCAGCTACTGGGATCGCCATCTATTGGGAACAAATAATGCTTGCTGGGTTACTCCTTCAAACCTGTCTGGCCTACTTTGTTCGGTTGGACAaaaacgaagatattttgaagaatgctttagatgtttattagacgtctattaaacattAATTTGTTTGCTGGGAAAGGATGAGtctgaatttagatttttggctgaactgtcctTTTAGCTATGCAGCGTTTACCTCgtaagacactttttttttttttttttagatgaagaTATACAAGAAGTGAGTGACGGATGTCCTGAAATGTCCTTACTCTGAGTTTCTAACGGTGTGTTCTGGGTGTTTAGACCGTTTGTCTGTGATTTAAAGTGATAGTTAactcaaatgtgtcattttcattcatttactcgccTTCAGGACATCCATTAAAGAGGAATTTTGTCCTTTGTGATTCATAACATGCAAGTTGACCGTCAAAAAAAGCAATTGGAAAACTAAAATCAATACCTAACAATCAGACTGGTCTAATGAAGCAAAATGACAACTCTCTGCACAAAACAAAACCTAATTATTGACATTTGACCTCCTCGGCCTCTGCTCTGATGTTCAGTTTCCTGCACGGGTCATTCACACTTCATTAGACGTCAGTGTTTCAGGAGTTACCGCTATTCGTTTAGTTTCTCCTGTATGTTTCTctgttgctttttatttttatagtccaGGCAGCtgttgcattttatgaatcaccaagtaTCACGTTTTCAGTTAAACCTGTAATGTTCAACTGAAGAGTCGCCTGATAGAgagtaaatgaacagcaaatgttcattttgggaTGAGCTCATCTTTTTAGATGTATTCTAGTTTGTTCTGGGCTCTGCGCTGACTGTATgttgttatatttaataataatttttggagtAATAGCAGAAATTCTACCTAGATGATGTTAGCGATGCTGACTTTGAAGAAGCAAATACTCAATATTAAGACAATAAAGCAATAATGCAAAGCTTTTGAGGG

Function

GO:

id name namespace
GO:0090141 positive regulation of mitochondrial fission biological_process
GO:0005741 mitochondrial outer membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-060929-864 Predicted to be involved in positive regulation of mitochondrial fission. Predicted to be active in mitochondrial outer membrane. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 49. Orthologous to human MIEF2 (mitochondrial elongation factor 2).

Ensembl:

ensembl_id ENSDART00000121439

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00002810 lncRNA upstream 847094 7672121 ~ 7674229 (+) True XLOC_000087
TCONS_00000171 lncRNA upstream 960469 7556999 ~ 7560854 (+) False XLOC_000086
TCONS_00000166 lncRNA upstream 967108 7546683 ~ 7554215 (+) True XLOC_000085
TCONS_00000161 lncRNA upstream 981607 7529853 ~ 7539716 (+) False XLOC_000085
TCONS_00003026 lncRNA downstream 41770 8573777 ~ 8575057 (+) True XLOC_000097
TCONS_00000190 lncRNA downstream 43300 8575307 ~ 8577274 (+) True XLOC_000098
TCONS_00000192 lncRNA downstream 55223 8587230 ~ 8590636 (+) False XLOC_000100
TCONS_00003027 lncRNA downstream 55338 8587345 ~ 8590636 (+) False XLOC_000100
TCONS_00003028 lncRNA downstream 56225 8588232 ~ 8590636 (+) True XLOC_000100
TCONS_00000185 mRNA upstream 4728 8508753 ~ 8516595 (+) True XLOC_000094
TCONS_00000182 mRNA upstream 14093 8442071 ~ 8507230 (+) False XLOC_000093
TCONS_00000184 mRNA upstream 23123 8492379 ~ 8498200 (+) True XLOC_000093
TCONS_00000183 mRNA upstream 32028 8487456 ~ 8489295 (+) False XLOC_000093
TCONS_00000181 mRNA upstream 117318 8314826 ~ 8404005 (+) True XLOC_000092
TCONS_00000189 mRNA downstream 2691 8534698 ~ 8540050 (+) True XLOC_000096
TCONS_00000191 mRNA downstream 47190 8579197 ~ 8586066 (+) True XLOC_000099
TCONS_00000193 mRNA downstream 61553 8593560 ~ 8597015 (+) True XLOC_000101
TCONS_00000194 mRNA downstream 69928 8601935 ~ 8610564 (+) True XLOC_000102
TCONS_00000195 mRNA downstream 130523 8662530 ~ 8670486 (+) True XLOC_000103
TCONS_00000154 other upstream 1457380 7063837 ~ 7063943 (+) True XLOC_000081
TCONS_00000149 other upstream 1733519 6787690 ~ 6787804 (+) True XLOC_000078
TCONS_00000134 other upstream 2335791 6182342 ~ 6185532 (+) False XLOC_000067
TCONS_00000123 other upstream 3019239 5497285 ~ 5502084 (+) True XLOC_000062
TCONS_00000121 other upstream 3070879 5438743 ~ 5450444 (+) False XLOC_000062
TCONS_00000208 other downstream 622087 9154094 ~ 9155273 (+) False XLOC_000113
TCONS_00000209 other downstream 622986 9154993 ~ 9155521 (+) False XLOC_000113
TCONS_00000213 other downstream 686641 9218648 ~ 9221616 (+) True XLOC_000115
TCONS_00000230 other downstream 1519767 10051774 ~ 10054771 (+) False XLOC_000126
TCONS_00000231 other downstream 1519777 10051784 ~ 10058057 (+) False XLOC_000126

Expression Profile

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