RNA id: TCONS_00021612


Basic Information

Item Value
RNA id TCONS_00021612
length 1419
RNA type mRNA
GC content 0.47
exon number 8
gene id XLOC_011085
representative True

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 51292624 ~ 51299061 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ACACTGGGAAGCTTCTGCTGATTATTCTGGCTCACTCGATTTTCTTTAGAGCTTGTGAAAATGGAGTCTCTGTCTGCAGCAAACACACAGTTTTCCCTCAACCTGTTCAAGAAGATCAGCGGAGGAAACGCATCAGGAAATGTGTTTTATTCTCCTGTCAGCATCTCCTCGGCTCTGGCCATGGTGTCGCTCGGTGCCAAAGGAAACACCGCAGATCAGATGTTTAAGGTCTTGGGCTTCAACAATCCTCCCAAACCTGGCGGAGCGACACCAACTCCTGCACAAGCAACCCAGAAGCCCAAATGGACATGTGGAGTCAAGAGTCAACATGAGCCACAAGCGCTGCAACAGCCACAGAAGTTTGAGTTACCTGCCGACCTCAAGAAATGTCCTGCTCAGCCGGTGCCTGGACAAAAAGCTGAGGAGCAAATTCACTCAAGCTTCAACAAGTTGATGAGTGAACTGAACAAACCAGGAGCCCCGTATGTGCTGAGTCTCGCCAACCGCCTCTACGGAGAGCAGACCTACCAGTTCCTTGAGAAATATCTCAGTGATGCAAAAAAATACTATGCAGCCGGACTGGAGAAGGTggactttaaaaataaatccgAAGCTTCATGTGTCAACATCAACAAATGGGTGGAGAAAAACACACAAGAGAAGATCAAGGATTTGCTGCCGTCAGGAGCCATTGATgcaatgaccagactggttttgGTGAACGCCATCTACTTCAAGGGGAATTGGGAGAAGAAATTCCCAAAAGAAGCCACAAAAGATGGACAGTTTAAGCTGAATAAGAATCAAACTAAACCAGTGAAGATGATGCACCAGAAAGCTCAATTTCCATTTGTCGTCATCCCAGAGATAAACAGTCAGATTTTGGAGCTGCCATATGTGGGGAAGAATCTCAGTATGTTGATCATCCTTCCTGATGAGATTGAAGATGCAACCACCGGCCTTCAGAAGCTTGAGAGGGCACTGACCTACGAGAAGCTCATGCAGTGGACCAAAGTGATGCGTCAACAGGAAGTACAAGTCTCTCTGCCCAAATTCAAGACGGAGCAAACCTACGACATGAAGAGTCTTCTGGTCAGCATGGGGATGGAGGATGTGTTTGACCCACAGAAGGTTAATCTAACAGGCATGTCCTCCAGCAATGACCTGGTGCTGTCCAAGGTCATTCATAAAGCCTTTGTTGAGGTCAATGAAGAAGGAACCGAAGCGGCTGCGGCCACCGGCGCCGTTGTTTCAATTCGCACTTTAGCACAGATATTTAATGCAGATCATCCGTTCCTTTTCTTCATCCGACACAATTCCACCAATACCATTCTGTTTTATGGACGCTTCTGTTCTCCCTGAAAATGATAAATACAAGTGCCTTGCTCATCTCTGTTAAATAAAGTCTCTAGTAAATGA

Function

GO:

id name namespace
GO:0010951 negative regulation of endopeptidase activity biological_process
GO:0005615 extracellular space cellular_component
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-7169 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be involved in negative regulation of endopeptidase activity. Predicted to be active in extracellular space. Human ortholog(s) of this gene implicated in peeling skin syndrome. Orthologous to several human genes including SERPINB8 (serpin family B member 8).

Ensembl:

ensembl_id ENSDART00000148677

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00022272 lncRNA downstream 212194 51078667 ~ 51080430 (-) False XLOC_011080
TCONS_00022273 lncRNA downstream 212194 51078915 ~ 51080430 (-) True XLOC_011080
TCONS_00022271 lncRNA downstream 2055523 49236408 ~ 49237101 (-) True XLOC_011064
TCONS_00022270 lncRNA downstream 2070531 49215478 ~ 49222093 (-) True XLOC_011063
TCONS_00022269 lncRNA downstream 2108140 49155860 ~ 49184484 (-) True XLOC_011062
TCONS_00021841 lncRNA upstream 576310 51875371 ~ 51884294 (-) False XLOC_011088
TCONS_00021842 lncRNA upstream 598695 51897756 ~ 51947869 (-) False XLOC_011089
TCONS_00021843 lncRNA upstream 1227791 52526852 ~ 52540111 (-) False XLOC_011091
TCONS_00021844 lncRNA upstream 1227811 52526872 ~ 52540100 (-) False XLOC_011091
TCONS_00021845 lncRNA upstream 1235456 52534517 ~ 52540136 (-) False XLOC_011091
TCONS_00021611 mRNA downstream 4446 51281959 ~ 51288178 (-) True XLOC_011084
TCONS_00021610 mRNA downstream 20618 51266576 ~ 51272006 (-) True XLOC_011083
TCONS_00021609 mRNA downstream 20662 51266502 ~ 51271962 (-) False XLOC_011083
TCONS_00021607 mRNA downstream 37930 51244297 ~ 51254694 (-) False XLOC_011082
TCONS_00021608 mRNA downstream 38699 51244692 ~ 51253925 (-) True XLOC_011082
TCONS_00021613 mRNA upstream 71045 51370106 ~ 51407525 (-) True XLOC_011086
TCONS_00021615 mRNA upstream 584664 51883725 ~ 51888988 (-) False XLOC_011088
TCONS_00021616 mRNA upstream 586319 51885380 ~ 51889734 (-) True XLOC_011088
TCONS_00021618 mRNA upstream 651449 51950510 ~ 51966846 (-) True XLOC_011090
TCONS_00021619 mRNA upstream 1237938 52536999 ~ 52540056 (-) True XLOC_011091
TCONS_00021604 other downstream 331262 50961246 ~ 50961362 (-) True XLOC_011078
TCONS_00021603 other downstream 357318 50935190 ~ 50935306 (-) True XLOC_011077
TCONS_00021599 other downstream 653838 50638670 ~ 50638786 (-) True XLOC_011073
TCONS_00021592 other downstream 1297030 49995478 ~ 49995594 (-) True XLOC_011068
TCONS_00021580 other downstream 3349367 47943143 ~ 47943257 (-) True XLOC_011054
TCONS_00021614 other upstream 456331 51755392 ~ 51755506 (-) True XLOC_011087
TCONS_00021617 other upstream 642769 51941830 ~ 51947781 (-) True XLOC_011089
TCONS_00021634 other upstream 2343759 53642820 ~ 53649995 (-) True XLOC_011102
TCONS_00021635 other upstream 2351841 53650902 ~ 53655539 (-) True XLOC_011103
TCONS_00021650 other upstream 3466440 54765501 ~ 54767193 (-) True XLOC_011121

Expression Profile

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