RNA id: TCONS_00022395



Basic Information


Item Value
RNA id TCONS_00022395
length 679
RNA type mRNA
GC content 0.44
exon number 4
gene id XLOC_011211
representative True

Chromosome Information


Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 5976683 ~ 5993452 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


TTGACATCACTGCCGACACCAATGGGACTgaATAACTCTCATCTCAAGCTGTACCCCGGAGACATTCTGGAGTTTCCCGGCAACAGCTTCTTTTCTCACTATGGAATTTACTACGGTGAAAGAGACGGAGTTCCTTACGTGGCTCATCTGACCATCAGAGACTCTGACACCAGACTGCTTCTCTTCGGCCGAGCCCTGAACGCCGCAGTGAAGCTCGACCCGCTCGACGTCGTCGGAAAGAAATTCAGAGTCAAAAACTACCTGGACGACAAGCATCCTCCACGAGACTTTTACTCCATCATCAAGCCGGAGATCGAGCACAGCATGACCAAACCCGTGACCTTCGACATTCTCTTCAACAACAGCGAACATCAGGCCACCATGTTTCGAAACGGGGTCAAAAAGTCCGAGCAGATCGAAAAAGTTTATTCCAAGATAGTTCCCACCTGGAAAGACTTATTTGAGAAGAGAAAGATTTAAGAGACGCATGATGCTGAATGAAGACACAGAAACATGCTTTCTTTTGAGATTTTGCCAAAACAATGAATCAAATGAAGAGGTTGAATCATCTAAATTAAAGTGTAGCCTCATTATAATCTGTGTTTTTGTATctgaatatgttttattattttggagATGAATGTGTTATGTCCGTCTCTCTCCAGAAGATGGCAGCAGA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000190844

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00024580 lncRNA upstream 122127 5847209 ~ 5863806 (+) False XLOC_011209
TCONS_00022388 lncRNA upstream 148239 5837308 ~ 5837694 (+) True XLOC_011208
TCONS_00024579 lncRNA upstream 1493220 4489340 ~ 4492713 (+) True XLOC_011199
TCONS_00024453 lncRNA upstream 1496022 4489255 ~ 4489911 (+) False XLOC_011199
TCONS_00024578 lncRNA upstream 1507201 4470293 ~ 4478732 (+) True XLOC_011198
TCONS_00024581 lncRNA downstream 215098 6208159 ~ 6211272 (+) True XLOC_011213
TCONS_00024582 lncRNA downstream 393579 6386640 ~ 6392567 (+) False XLOC_011217
TCONS_00024583 lncRNA downstream 393581 6386642 ~ 6392567 (+) False XLOC_011217
TCONS_00024584 lncRNA downstream 393615 6386676 ~ 6392567 (+) False XLOC_011217
TCONS_00024586 lncRNA downstream 393647 6386708 ~ 6392567 (+) False XLOC_011217
TCONS_00022393 mRNA upstream 34188 5931530 ~ 5951745 (+) False XLOC_011210
TCONS_00022392 mRNA upstream 34188 5931530 ~ 5951745 (+) True XLOC_011210
TCONS_00022389 mRNA upstream 56991 5846202 ~ 5928942 (+) False XLOC_011209
TCONS_00022396 mRNA downstream 86820 6079881 ~ 6101820 (+) True XLOC_011212
TCONS_00022397 mRNA downstream 224643 6217704 ~ 6267717 (+) True XLOC_011214
TCONS_00022398 mRNA downstream 283498 6276559 ~ 6282608 (+) True XLOC_011215
TCONS_00022399 mRNA downstream 389214 6382275 ~ 6385314 (+) True XLOC_011216
TCONS_00022400 mRNA downstream 459450 6452511 ~ 6462588 (+) True XLOC_011218
TCONS_00022376 other upstream 1115411 4870403 ~ 4870522 (+) True XLOC_011202
TCONS_00022375 other upstream 1324890 4660919 ~ 4661043 (+) True XLOC_011201
TCONS_00022357 other upstream 2900168 3085649 ~ 3085765 (+) True XLOC_011185
TCONS_00022356 other upstream 3057741 2928074 ~ 2928192 (+) True XLOC_011184
TCONS_00022353 other upstream 3312026 2673793 ~ 2673907 (+) True XLOC_011180
TCONS_00022422 other downstream 1326981 7320042 ~ 7320165 (+) True XLOC_011231
TCONS_00022433 other downstream 1668147 7661208 ~ 7661324 (+) True XLOC_011238
TCONS_00022440 other downstream 2097296 8090357 ~ 8090474 (+) True XLOC_011242
TCONS_00022450 other downstream 2307329 8300390 ~ 8300504 (+) True XLOC_011249
TCONS_00022453 other downstream 2479040 8472101 ~ 8472217 (+) True XLOC_011252

Expression Profile


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