Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00024618 |
| length | 724 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 5 |
| gene id | XLOC_011306 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007128.7 |
| NCBI id | CM002901.2 |
| chromosome length | 53461100 |
| location | 13813423 ~ 14059995 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0044424 | obsolete intracellular part | cellular_component |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0043226 | organelle | cellular_component |
| GO:0043227 | membrane-bounded organelle | cellular_component |
| GO:0043229 | intracellular organelle | cellular_component |
| GO:0043231 | intracellular membrane-bounded organelle | cellular_component |
| GO:0016741 | transferase activity, transferring one-carbon groups | molecular_function |
| GO:0008168 | methyltransferase activity | molecular_function |
| GO:0032183 | SUMO binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00024459 | lncRNA | upstream | 211484 | 13596461 ~ 13601942 (+) | True | XLOC_011304 |
| TCONS_00024616 | lncRNA | upstream | 211605 | 13373393 ~ 13601821 (+) | False | XLOC_011304 |
| TCONS_00024617 | lncRNA | upstream | 211605 | 13590309 ~ 13601821 (+) | False | XLOC_011304 |
| TCONS_00024615 | lncRNA | upstream | 369734 | 13221935 ~ 13443692 (+) | False | XLOC_011304 |
| TCONS_00024624 | lncRNA | downstream | 3930 | 14020141 ~ 14024410 (+) | True | XLOC_011306 |
| TCONS_00024625 | lncRNA | downstream | 441293 | 14457504 ~ 14458203 (+) | True | XLOC_011308 |
| TCONS_00022556 | lncRNA | downstream | 768047 | 14784258 ~ 14788517 (+) | False | XLOC_011310 |
| TCONS_00022557 | lncRNA | downstream | 768064 | 14784275 ~ 14790388 (+) | False | XLOC_011310 |
| TCONS_00022559 | lncRNA | downstream | 773277 | 14789488 ~ 14794520 (+) | True | XLOC_011310 |
| TCONS_00022550 | mRNA | upstream | 32927 | 13664442 ~ 13780499 (+) | False | XLOC_011305 |
| TCONS_00022551 | mRNA | upstream | 32927 | 13763425 ~ 13780499 (+) | True | XLOC_011305 |
| TCONS_00022547 | mRNA | upstream | 703305 | 13099476 ~ 13110121 (+) | False | XLOC_011303 |
| TCONS_00022546 | mRNA | upstream | 715107 | 13088594 ~ 13098319 (+) | True | XLOC_011302 |
| TCONS_00022545 | mRNA | upstream | 774675 | 13031497 ~ 13038751 (+) | True | XLOC_011301 |
| TCONS_00022553 | mRNA | downstream | 409008 | 14425219 ~ 14442570 (+) | True | XLOC_011307 |
| TCONS_00022554 | mRNA | downstream | 436118 | 14452329 ~ 14458667 (+) | False | XLOC_011308 |
| TCONS_00022555 | mRNA | downstream | 695554 | 14711765 ~ 14712599 (+) | True | XLOC_011309 |
| TCONS_00022558 | mRNA | downstream | 768064 | 14784275 ~ 14794741 (+) | False | XLOC_011310 |
| TCONS_00022561 | mRNA | downstream | 870617 | 14886828 ~ 14889196 (+) | False | XLOC_011312 |
| TCONS_00022538 | other | upstream | 891051 | 12918748 ~ 12922375 (+) | True | XLOC_011295 |
| TCONS_00022537 | other | upstream | 944482 | 12868830 ~ 12868944 (+) | True | XLOC_011297 |
| TCONS_00022534 | other | upstream | 1011847 | 12801464 ~ 12801579 (+) | True | XLOC_011296 |
| TCONS_00022522 | other | upstream | 1149657 | 12658568 ~ 12663769 (+) | True | XLOC_011291 |
| TCONS_00022502 | other | upstream | 2411466 | 11401947 ~ 11401960 (+) | True | XLOC_011274 |
| TCONS_00022579 | other | downstream | 1417315 | 15433526 ~ 15435628 (+) | False | XLOC_011326 |
| TCONS_00022581 | other | downstream | 1500907 | 15517118 ~ 15517232 (+) | True | XLOC_011327 |
| TCONS_00022584 | other | downstream | 1519542 | 15535753 ~ 15537359 (+) | True | XLOC_011328 |
| TCONS_00022592 | other | downstream | 1885214 | 15901425 ~ 15901547 (+) | True | XLOC_011334 |
| TCONS_00022601 | other | downstream | 2073949 | 16090160 ~ 16107144 (+) | False | XLOC_011337 |
