RNA id: TCONS_00022662



Basic Information


Item Value
RNA id TCONS_00022662
length 1157
RNA type mRNA
GC content 0.43
exon number 5
gene id XLOC_011373
representative False

Chromosome Information


Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 20605013 ~ 20611312 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GCTTAATGAAGACAAGCAGAATAGTTCTACAGAGACAGAACACCGCAATGCTTACATGGTCAAAAGAacgaatagaatagaatagaatagaatagaaatagCAGTATCAAAAGTAGTTCTGTTCACTATAATGTGCTCTAAGCACTGTGGCGGAgccaaaggggtggccagggTGGCACTGGACAGCCCTGTCATATGATTGGCCACCCGGATGCCATCCCAATACTTTATTCTCTACTTTCAGTTGCTGCTGATGCAAATTAACATCTCATCGAAAGAAGTTAATGTCGAAGTTTCATTAAAGAAGCTATTTTCAAATCGAGGACGACCCGAAGACGGGAAAAAGCAATTTCAAGATaaaaacaagatgatgaAGCTATTAGTGCTGTTAGCAGCAGTGGCTTACTGCAATGCCTGCAGACTGGAAGGTTTCTCTGAAGACACCACTGACAAACCACAAGGTTGTTCTGACTCTGATGGAAATCTCCACGAATTTAACTCTGAATGGGAGAATGGACCTGAAACCTGTGTCTGTGTTGATTTTGGAATTATCTGTTGTGAAAGGTCATGGGAACAATTTGATAACAGCGTCCCACCAGAACCCCCCACCACCCCTCAGATCATTGCTGATGATTATGAAGACTTATATGGACATCCAAAACAATCCAAtgAAGAGCAAGACTCACAAGAAGTCCCCAGTGAGCCAAATGAAGCTGAACCTGAACCAGAAGCTGAACCTGAACCAGAAGCTGAACCTGAAGGAGAACCTGAAGCAGAAGCTGAACCAGAAGCAGAACCTGAAGAAGAAGCAGAACCTGAAGAAGAAGCAGATCCTGAAGAAGAACCTGAAGCAGAAGCTGAACCTGAAGGAGAACCTGAAGAAGAAGCAGAACCTGAAGAAGCAGAACCTGAAGAAGAAGCAGAACCTGAAGCAGAAGCTGAACCTGAAGAAGAAGCAGAAGCTGAACCTGAAGAAGAAGCAGAAGCTGAACCTGAAGCTGAACCTGCAGATAACTCTCAGGAAGCAGCTGAGGACAATGAATAATCTGAAAAATCCTGAACAGGAAAAACTCTTATAAAATACAGTACAAGGTTACATTATGTTGAATGAGCTGATACAtaaagcattataaataaaacaaacatacctGAGCATG

Function


GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-131121-416 No description available

Ensembl:

ensembl_id ENSDART00000156878

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00024676 lncRNA upstream 167715 20251461 ~ 20437298 (+) False XLOC_011370
TCONS_00022655 lncRNA upstream 208211 20251491 ~ 20396802 (+) True XLOC_011370
TCONS_00024675 lncRNA upstream 232274 20251461 ~ 20372739 (+) False XLOC_011370
TCONS_00024674 lncRNA upstream 339301 20251461 ~ 20265712 (+) False XLOC_011370
TCONS_00022647 lncRNA upstream 419002 20173818 ~ 20186011 (+) False XLOC_011367
TCONS_00024677 lncRNA downstream 106664 20717976 ~ 20725895 (+) True XLOC_011376
TCONS_00024466 lncRNA downstream 256998 20868310 ~ 20868536 (+) True XLOC_011377
TCONS_00024678 lncRNA downstream 326942 20938254 ~ 20940831 (+) True XLOC_011379
TCONS_00024679 lncRNA downstream 367940 20979252 ~ 20986376 (+) True XLOC_011380
TCONS_00024467 lncRNA downstream 478462 21089774 ~ 21090112 (+) True XLOC_011381
TCONS_00022661 mRNA upstream 12062 20589553 ~ 20592951 (+) True XLOC_011372
TCONS_00022659 mRNA upstream 14775 20576848 ~ 20590238 (+) False XLOC_011372
TCONS_00022658 mRNA upstream 16406 20569806 ~ 20588607 (+) False XLOC_011372
TCONS_00022656 mRNA upstream 86387 20500229 ~ 20518626 (+) False XLOC_011371
TCONS_00022657 mRNA upstream 87167 20504196 ~ 20517846 (+) True XLOC_011371
TCONS_00022665 mRNA downstream 4884 20616196 ~ 20620944 (+) False XLOC_011374
TCONS_00022667 mRNA downstream 5264 20616576 ~ 20620950 (+) False XLOC_011374
TCONS_00022669 mRNA downstream 27868 20639180 ~ 20640505 (+) True XLOC_011375
TCONS_00022670 mRNA downstream 312379 20923691 ~ 20929461 (+) True XLOC_011378
TCONS_00022671 mRNA downstream 490989 21102301 ~ 21123575 (+) True XLOC_011382
TCONS_00022660 other upstream 12055 20585328 ~ 20592958 (+) False XLOC_011372
TCONS_00022650 other upstream 415618 20175646 ~ 20189395 (+) True XLOC_011367
TCONS_00022634 other upstream 1805882 18798995 ~ 18799131 (+) True XLOC_011356
TCONS_00022631 other upstream 2426866 18175688 ~ 18178147 (+) True XLOC_011352
TCONS_00022623 other upstream 2579813 17914479 ~ 18025200 (+) False XLOC_011350
TCONS_00022664 other downstream 4704 20616016 ~ 20626819 (+) False XLOC_011374
TCONS_00022666 other downstream 4887 20616199 ~ 20620945 (+) False XLOC_011374
TCONS_00022668 other downstream 14461 20625773 ~ 20630315 (+) True XLOC_011374
TCONS_00022679 other downstream 953295 21564607 ~ 21607709 (+) True XLOC_011388
TCONS_00022689 other downstream 1306136 21917448 ~ 21917564 (+) True XLOC_011392

Expression Profile


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