RNA id: TCONS_00000191


Basic Information

Item Value
RNA id TCONS_00000191
length 6870
RNA type mRNA
GC content 0.44
exon number 1
gene id XLOC_000099
representative True

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 8579197 ~ 8586066 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGTCCGATCTTGATAGAGTTTTAGAAGAGGGGGATGCTTTGTATGTCAGCGTTAAAATGCAGCTTATCAGTGAAAGAAGATTCCTTAATGACCATCTGTCCATGGAGGAAATACCTTCTGAACTTACAACATTTAACCGAACATACAATGTTCACAAGTCTGAAGTCAAACTTGGATTACTCAAAGCCAAAGGTGCCCCTGATATGGAAGATTGGTTTTTGCCTCTTGCTGAAAGATTGCAGTGTCTCGCAGCAGATGTCACATTTGCACTTTTAATCGTTTCTCCAGAATGCATTGCATTGTTTAGAGATGGATCAGGCAGATATGGATTCTTTGATCCACATTCAAGGACTGCAGAAGGCTTGCCTGATAAGACCGGATGTGGAACTGCTGTCATGTTAACTTTTACTCATCTAAGTGACATGACCGATAAACTTCTTGAGCTCTTTCAGGATCGCCGTGATGGAGCAAGCTATGAATTCATGCCTGTTTCTTTTGAAACTGAGCAGTGGGCTGGCCAGCAGCCATTACTCTCAGCTTGTGCTCAGTTTTCACAAGTAATCTCAGTTCTACCAGAACCAGAAGAAAATGTTGCTGTACAAAATAGCGGTGCCCGAGAAAACCAAGCCCtgatagcaaaaaaaaacaagtccAGGAGAAGAAGAGAAATGCGAAAGACAATTGCCAATTTAAATTGCAGAGAATCCAAGGACACAACTGCATCTTACATGATgagaaaacacaaacaaagaGATGATGAGAGGTACCGGTATGCTGCCTGTTTGCAGTATCGGGCAGCTAAGAAAGAGGCTGTTTGGGTGAAGTACCAAAATGCTCACTttagaaacaaaaagaaagacTACAGTAATATGCGATACAAAGATGATATTGTTCAGTCAAAGAAGAAAGAATTTATGGCTAGGAGGTACACCACAGATCCAGTTGTACAGTCAAAGAAGAAAGAATACATGGCTAGGAGGTACACCAAAGATCCAGTTGTACAGTCAAAGAAGAAAGAATACATGGCTAGGAGGTACACCAAAGATCTAGTTGTACAGTCAAAGAAGAAAGAATACATGGCTAGGAGGTACACCACAAATCCAGTTGTACAGTCAAAGAAGAAAGAATACATGGCTAGGAGGTACACCACAGATCCAATTGTACAGTCAAAGAAGAAAGAATACATGGCTAGGAGGTACACCACAGATCCAATTGTACAGTCAAAGAAGAAGCAATACATGGCTAGGAGGTACACAATAGATCCAGTTGCACCGTTAAAGAGGAAAGAATACATGGCTAGGAGGTACAGATCCGATACCATCTTccaggcaaaaaaaaaagcacacatggTCAGGAGGTACTGTACCGATACTGCTTTCCAGAAAAAAATGAAGGAATACATGGTGAGGAGATATGCGGATAATTCTGAGTTTAGAGAACATCACATTCTTCAATGTACCCTCCGTAAGAAACAAAAGTTTGATACTACATCACGTATTCTTCATCAGATGCAATGTGCACTGACGATTAAAAGGAAATACAAGATGTGCATCCGCCCCAGCCTGGAAACAGTCCAGCCATTGGTCAGCAAACTGATGGAAAGTGCAATTCATGCATTCCGGTGTAAGATTCAGCAAGGCCCTACATACGTCTGCACCGTTTGTCACAGAGTCCTCTTTCTGGACCAGGTCAAGGCTTGTGATCGATCAAATTATGAAAAAGATGTTCAACTTTCCTCATTCTGCCTGACCAGAAAGTATGTGCATACTTGTGACAGTGCCTGCTCAGATGATTGCACCGTTCCAGAAGAGAGAAGACGGGAATGGATCTGCCACACTTGTGACAGCCATCTGAAACGAGGGAGCATGCCTTCAATTGCAGCAGTAAATAAGCTTGAACTGCCACCTATCCCTGCAGAATTGGCTGAGTTAAATGTGCTGGAACGTCAGCTTATCGCAAAAATTTTACCTTTTGCAAAAATAGTTGCACTGCCCAAAGGACAACAGAGAGCAGTTCAcggtgctgttgtgtgtgtgccttCAGAGGTGGAGAACACTGTCAACTCTCTGCCAAGACCAAGAAGTGAGTCCCAGCTCCTACAGGTCAAATTGAAGAGACATGTCAGTTTTAAGGGATACCAGCATTTCCATACTGTAAATATGCACAGTGTGATTGCAGCTTTATCCAAGCTGAAGGAAGTGCATTCTGAGTACAAGGATATCTCCATACAAGAGCCTGAGGTATCTGAAGATCAGTTTGACGAAGACATTGATGCAGCAGAGGATAACCAAGAAGTTGGCACTGCTGAGCACGAGGAGCAACATGTCAGTGTGGAGGAAAAGGATGAACTTCGCCCCGGTCTTACATTGGACACGTGCATGCAGCCACCAGACATTGCACATGACATCTTGTCGTACGGTGAAGGGATCTTTAGTATCGCACCTGCACAAGGAAAGAAGCCTGTTGGATTTTTTAAAATCCCAAAACTGGAAGCCATGGCATTCCCTGTCCAGTTCCCCACTGGAGAGAACACAATCGACGAGGCAAGGCAGACATCGGTTTCTCCTAGCATGTACTTCAACGTCAGATTGTTTTGTGTTGATGCCCGATTTGCAAGGGATCAAACCTACCTTTTCTTTGCACAATTTGTGACAGAAACGCAACTGGCAAGAAACAGCATGTCCATTCAACTTCGAAAAGGTAAACCCATTACCAAAGATGGCAGAAGAATCTCCAATAGGATGCTTCAGGATTCAGATGAGGTTGAGAGACTTGTTCACAACAGGGATGCCACACGATTCATGCAGCCCCTGAGAGGCTCTCCAGCCTATTGGGAGAAGACGTTGCGAGATCTCCAGGCCATGATTCGACAGCTGGGGACACCTACTTTCTTTTGTACATTCAGTGCAGCAGAAATGCGATGGCCTGAGATTGTGACTGTAATCAAAGCTCAACAAGGCGAAGAAATTGACTTTTCACAGCTTGACTGGGCGACGAAATGTGAAATCCTTAGGAGTAATCCTGTCACTGTCATGCGCATGTTTGAGAAGCGTGTTGATGCATTAATGGCTCACCTGCTTTTGTCACCTGCACAACCCATTGGTGAAGTGGAGGATTTCTTCTATAGAGTGGAGTTTCAGGCGAGAGGAAGCCCACATATTCATCTGCTTGCTTGGGTAAAGGATGCCCCAGATCCAGAGGAAGATAATGATGAGACAATTTGTGACTTCATCGACCGTTACGTATCGTGCAAGCTTCCAGATCCCAATGTTGATCCTGAGCTTCATAAGATTGTGACAGAGGTTCAGCTTCATAGCAAAAACCACTCAAAGTCATGCAAGAAAGGCAAGGTGGTGTGTAGATTTGGATTTCCAAAACTACCAATGCCTAAGACCATGATCACTCATCCAATGCCAGAGCGTCCTGATGAGGGGGATGATGAACCTACTGACTCGGCAGCCAAGAAGAAAGCAAGGCGAGATGCGGCTAAAAAAGCAATGAATGAAGCCAAATCAAAACTCAAGCCTTTGTGGGATTTGCTGAATGATCCCAAATCTTCCCTCGACAATTTGTCAGACCTTTTAACCAAGTGCAATTTGTCCATGGACGATTACCTGAACTACGCTGAAGGACTCACCACTGGCAGTGCAGTTCTTTTGAAGCGTGATCCAAAGGAGACTTGGGTGAATGGCTACAATCCTGATTTGCTCAGGGCGTGGAATGCGAACATGGATATTCAGTACATCCTAGACGCTTACAGCTGCATCATGTATATGCTGTCCTACGTTTCAAAGCCAGAGCATGAAATGAGTGGCTTTCTTAAGAACGTGATCCAGAGTGTTCGTGAAGCCAACGTTAATGAAGAGGACGAAATGAAGCACATAATGCAAGCCTATGCCAAGCACCGGCAAGTAAGCGCTCAGGAGTCCGTTGCGCGAACATGCAGCTTGCCATTGAAGAAGTGTTCACGAAGTGTTGTGTTTGTTCCGACGGATGACGATGCCCTCAAGATGAGTCTGCCCATAAGTGTGTTGCTGAACAAAAATCCTGAATCGGAGGACGTCTGGATGTCAGGTTTAATAGAAAAATACAGAGCAAGACCTCTAACGTTGGAGTTTGAAAAAATGTGTCTTGCGGACTTTGCATCCAATTACCGTGTTGTGTACGGTCAGCAAATTAAAGGAAAAAATGTCCTCCGACTGCTTCATGATATGGGATTTATTCAAAAGAGGACTGTTGGCAAGCCTGCAGTTATCCGATATGCTCGCTTTTCAGAGGAGAAGCAACCGGAAAAATTTTATGGAAGAATGGTGAAACTTTACGTTCCCCATCGCCACAATGAAGAGCTGAAACCTGAGGATTTTCCCACATATCAGCTATTTTATAAAAGCGGATTTGTGGAACTTCCTGGACATCCTGGTCTCCGGTTCCCTGTCTGCGGCATAGTAAAGGCATACCAGCAGAGATATGAAAAGCACGGCAAAGTTGTAGATAAAGCATTTGAACAACTTCAGCAGGAAGGACCATCTGAGAGTGCTTGGACAGCTTTTGCACCAGAAGTTGAAGTGGATCGCCTGGAATGCATAGCTGAACAAGAAGACGTCGGTCCAGAGGAAGACGACGAACAGGATGAGGTCCCTGAATTCCAGCCTCGTAATGAAGATGGCGATGGAGTTGCACCGCGCATAGAGGCGCCACAGATGAGTGTCGAGTTTGTCAGGAAGCTCTTTCGGAGTTTAAACAAGACACAGGCAGCCATATTTTACACCATTCGGCAGTGGTGTCAAAATCGTGTGTGGGGACTGAATCCAGAACAGTTTTTTTACTTCGTGTCAGGTGGTGCTGGATGTGGAAAGTCGCACGTAATCAAGTGCGTATACACTGAAGCAACGAAGATTCTACGACAACTTCCTCAGCTCCGGGAGGATGGGGATCTCTCCATTCCTACAGTGATTTTAAGTGCATTCACTGGAACAGCAGCGTTCAACATTTCTGGAAAAACTCTGCATTCCATTCTAAAGCTGCCAAGGAACTTGAAGCCACCCTATCAAGGACTTGGGAACTCTCTTGATGATGTACGAGCAGGATTACGTCACGTGGAAATCTTGATTATTGACGAAATCTCTATGATTTCAAAAGACTTTTTTGCATACATCAACTGGAGGTTTCAACAGATCAGAGGCAGCAAGAAACCCTTTGGGGGCATTTCTGTCATTGTGGTGGGAGACTTTTATCAATTACCGCCCCCGGGAAAAGCCAAGCCACTCTGCGTTTACGAAGAGGATGTGCTGGACTTTTGGAAGGACCACTTCCAAATCATAACCCTCACGGAGATCATGCGGCAGAAAGAGGACCTTGCATTTGCCCAGCTTTTAAACCGATTGAGAGTGAAACGGAAATCTGATCCTCTTAAAGAAGAAGATAGATCTTTGTTATTGCAGGCTGTGAGGAATCCCCAAGACTGCCCACGTGATGCATTGCACATATTTGCAACCAACAAGGAAGTCCACAGTCACAATAGTGAGACGGTAAACGCTCTTCATGCTGACATCATAACCATTCATGCTGAAGATTACCGGAAAGACCCAAGAACAGGTGGGATGAAAAGACAGACTAAACCTGTCATGGGTAATAAAGACGACCTGCTTGACACCATACAAGTTGCAGTGGGAGTCCGCATAATGATGATAAGAAATCTGGATGTCGAAGATGGACTCGTCAATGGATGCTTTGGAAACATTAGAAACATTGTGACTAAAACAAGAGATGGAATTGCATTTGTGCACATGCTTGGCATTCAGCCCGACAATCCAAATGCTGGCCAGAAATACAGACGACGACTGCAAGGTGAACAGGACACTTTAGTCTACATCGAAAGATCAGAGGAACCTGTAAAGAAAAGAGCAGTCCGTCGACAATTTCCAATCAAGTTGGCCTACGCATGCACCGCTCATAAAGTTCAAGGCATGACCATGCAATCGGCTGTAGTGTCACTAAAGAGGATTTTTGAGCCAGGAATGGCCTATGTTGCCCTTAGCCGAACAACCTCACTTGGTGGGTTGTACATCAGAGACTTTGATGAAAAAAAGATCTATGCTGATCCGGAAATCACAACCTCGTTGGAGAGGATGAAAATGGCAACGCTGGAAGGCATCATGCCACTTTTTGACTGGAAGAAAAGCAACACCAGTCTGGTAGAAAAACTTATTGTTGTGCATCATAACACAGAGGGACTCCAATCACATGTAGAAGACATCAAACACCATCATGAGCTGCTTCTATGTGATATCTTTTGTGTTACGGAAACGCACCTCTCCGGATCATGCATCTCATCACATGTCCAGTTGGAAGGCTTTAAGATGTTTGCAAGAAATAGACATGCGTCTTACTCAACCCTTCCAGAAATGGCAAAGAAGGACTGTGGTGGAGTTGCAATTTATTGCAAAGAGGACATTCAGGCGGAACCTCGACACTTTATACACCACGTCACCGACCTGGAGTTTGTCGTCATCAAAGTTGATGCACCAGTGACTGCAACAATTGCTGCGGTGTACAGGCCACCAGACTATAGTCTGGAAAAATTTTTGCCAAACATCAGGGGCCTTCTTGATTATTTGGAAATGATGAAGGAGAATCCCATAATTGTCTGTGGAGACTTCAACGAAGACCACCTCTCGTCTGGAAGAAAGCCCATTCTGGAGTTGTTCCAATCCCAACAATACCAACAGCTCATCACCATGGCAACCACAGAGAAACAAACACTGTTGGATCATATTTATGTTTCTCATCCAGACTTGTGCATGCAGTCAGGTGTTTTACACACCTACTATAGCTATCACAATCCAGTGTATTGTGTTTTGCCTAAATAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000186329

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00000190 lncRNA upstream 1923 8575307 ~ 8577274 (+) True XLOC_000098
TCONS_00003026 lncRNA upstream 4140 8573777 ~ 8575057 (+) True XLOC_000097
TCONS_00002810 lncRNA upstream 904968 7672121 ~ 7674229 (+) True XLOC_000087
TCONS_00000171 lncRNA upstream 1018343 7556999 ~ 7560854 (+) False XLOC_000086
TCONS_00000166 lncRNA upstream 1024982 7546683 ~ 7554215 (+) True XLOC_000085
TCONS_00000192 lncRNA downstream 1164 8587230 ~ 8590636 (+) False XLOC_000100
TCONS_00003027 lncRNA downstream 1279 8587345 ~ 8590636 (+) False XLOC_000100
TCONS_00003028 lncRNA downstream 2166 8588232 ~ 8590636 (+) True XLOC_000100
TCONS_00000197 lncRNA downstream 108225 8694291 ~ 8699111 (+) True XLOC_000104
TCONS_00003029 lncRNA downstream 364808 8950874 ~ 8965939 (+) False XLOC_000105
TCONS_00000189 mRNA upstream 39147 8534698 ~ 8540050 (+) True XLOC_000096
TCONS_00000187 mRNA upstream 47188 8521323 ~ 8532009 (+) False XLOC_000095
TCONS_00000186 mRNA upstream 47190 8521323 ~ 8532007 (+) False XLOC_000095
TCONS_00000188 mRNA upstream 49384 8521332 ~ 8529813 (+) True XLOC_000095
TCONS_00000185 mRNA upstream 62602 8508753 ~ 8516595 (+) True XLOC_000094
TCONS_00000193 mRNA downstream 7494 8593560 ~ 8597015 (+) True XLOC_000101
TCONS_00000194 mRNA downstream 15869 8601935 ~ 8610564 (+) True XLOC_000102
TCONS_00000195 mRNA downstream 76464 8662530 ~ 8670486 (+) True XLOC_000103
TCONS_00000196 mRNA downstream 108130 8694196 ~ 8702684 (+) False XLOC_000104
TCONS_00000199 mRNA downstream 398002 8984068 ~ 8988504 (+) False XLOC_000107
TCONS_00000154 other upstream 1515254 7063837 ~ 7063943 (+) True XLOC_000081
TCONS_00000149 other upstream 1791393 6787690 ~ 6787804 (+) True XLOC_000078
TCONS_00000134 other upstream 2393665 6182342 ~ 6185532 (+) False XLOC_000067
TCONS_00000123 other upstream 3077113 5497285 ~ 5502084 (+) True XLOC_000062
TCONS_00000121 other upstream 3128753 5438743 ~ 5450444 (+) False XLOC_000062
TCONS_00000208 other downstream 568028 9154094 ~ 9155273 (+) False XLOC_000113
TCONS_00000209 other downstream 568927 9154993 ~ 9155521 (+) False XLOC_000113
TCONS_00000213 other downstream 632582 9218648 ~ 9221616 (+) True XLOC_000115
TCONS_00000230 other downstream 1465708 10051774 ~ 10054771 (+) False XLOC_000126
TCONS_00000231 other downstream 1465718 10051784 ~ 10058057 (+) False XLOC_000126

Expression Profile

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