Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00022959 |
| length | 914 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 5 |
| gene id | XLOC_011523 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007128.7 |
| NCBI id | CM002901.2 |
| chromosome length | 53461100 |
| location | 30369107 ~ 30418016 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0021983 | pituitary gland development | biological_process |
| GO:0060026 | convergent extension | biological_process |
| GO:0005575 | cellular_component | cellular_component |
| GO:0003674 | molecular_function | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-070112-332 | Acts upstream of or within convergent extension; pituitary gland development; and somite development. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including central nervous system; gonad; midbrain neural keel; neural tube; and paraxial mesoderm. Orthologous to human GREB1 (growth regulating estrogen receptor binding 1). |
| ensembl_id | ENSDART00000076611 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00022954 | lncRNA | upstream | 640653 | 29723351 ~ 29728743 (+) | True | XLOC_011521 |
| TCONS_00024703 | lncRNA | upstream | 1291554 | 29021960 ~ 29077842 (+) | False | XLOC_011517 |
| TCONS_00024470 | lncRNA | upstream | 1331614 | 29021981 ~ 29037782 (+) | True | XLOC_011517 |
| TCONS_00024702 | lncRNA | upstream | 1536684 | 28822373 ~ 28832712 (+) | False | XLOC_011515 |
| TCONS_00022960 | lncRNA | downstream | 24794 | 30411712 ~ 30414307 (+) | True | XLOC_011523 |
| TCONS_00022971 | lncRNA | downstream | 200577 | 30587495 ~ 30589136 (+) | True | XLOC_011526 |
| TCONS_00024471 | lncRNA | downstream | 357811 | 30744729 ~ 30745172 (+) | True | XLOC_011529 |
| TCONS_00022980 | lncRNA | downstream | 461520 | 30848438 ~ 30849810 (+) | True | XLOC_011531 |
| TCONS_00022982 | lncRNA | downstream | 738237 | 31125155 ~ 31127838 (+) | False | XLOC_011533 |
| TCONS_00022955 | mRNA | upstream | 95081 | 30205258 ~ 30274315 (+) | False | XLOC_011522 |
| TCONS_00022956 | mRNA | upstream | 132661 | 30205406 ~ 30236735 (+) | True | XLOC_011522 |
| TCONS_00022953 | mRNA | upstream | 999832 | 29348013 ~ 29369564 (+) | False | XLOC_011520 |
| TCONS_00022961 | mRNA | downstream | 55600 | 30442518 ~ 30470271 (+) | False | XLOC_011524 |
| TCONS_00022962 | mRNA | downstream | 61534 | 30448452 ~ 30458637 (+) | False | XLOC_011524 |
| TCONS_00022964 | mRNA | downstream | 63245 | 30450163 ~ 30468606 (+) | True | XLOC_011524 |
| TCONS_00022966 | mRNA | downstream | 135846 | 30522764 ~ 30589141 (+) | False | XLOC_011526 |
| TCONS_00022967 | mRNA | downstream | 135846 | 30522764 ~ 30589694 (+) | False | XLOC_011526 |
| TCONS_00022936 | other | upstream | 1668113 | 28670177 ~ 28701283 (+) | False | XLOC_011513 |
| TCONS_00022941 | other | upstream | 1675378 | 28691129 ~ 28694018 (+) | False | XLOC_011513 |
| TCONS_00022911 | other | upstream | 2908613 | 27456956 ~ 27460783 (+) | False | XLOC_011502 |
| TCONS_00022906 | other | upstream | 2967053 | 27402261 ~ 27402343 (+) | True | XLOC_011500 |
| TCONS_00022877 | other | upstream | 3749439 | 26619840 ~ 26619957 (+) | True | XLOC_011488 |
| TCONS_00022963 | other | downstream | 61614 | 30448532 ~ 30460493 (+) | False | XLOC_011524 |
| TCONS_00022965 | other | downstream | 109806 | 30496724 ~ 30496840 (+) | True | XLOC_011525 |
| TCONS_00022973 | other | downstream | 211455 | 30598373 ~ 30603607 (+) | True | XLOC_011527 |
| TCONS_00022977 | other | downstream | 409955 | 30796873 ~ 30797919 (+) | True | XLOC_011530 |
| TCONS_00023004 | other | downstream | 1682340 | 32069258 ~ 32069372 (+) | True | XLOC_011547 |
