Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00023190 |
| length | 5267 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 11 |
| gene id | XLOC_011685 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007128.7 |
| NCBI id | CM002901.2 |
| chromosome length | 53461100 |
| location | 45009868 ~ 45030025 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006744 | ubiquinone biosynthetic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0005743 | mitochondrial inner membrane | cellular_component |
| GO:0042995 | cell projection | cellular_component |
| GO:0005794 | Golgi apparatus | cellular_component |
| GO:0031314 | extrinsic component of mitochondrial inner membrane | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | molecular_function |
| GO:0016712 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen | molecular_function |
| GO:0004497 | monooxygenase activity | molecular_function |
| GO:0016491 | oxidoreductase activity | molecular_function |
| GO:0050660 | flavin adenine dinucleotide binding | molecular_function |
| GO:0071949 | FAD binding | molecular_function |
| id | description |
|---|---|
| ko00130 | Ubiquinone and other terpenoid-quinone biosynthesis |
| id | description |
|---|---|
| ZDB-GENE-060825-297 | Predicted to enable oxidoreductase activity. Predicted to be involved in ubiquinone biosynthetic process. Predicted to be located in Golgi apparatus; cell projection; and mitochondrial inner membrane. Predicted to be extrinsic component of mitochondrial inner membrane. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in primary coenzyme Q10 deficiency 6. Orthologous to human COQ6 (coenzyme Q6, monooxygenase). |
| ensembl_id | ENSDART00000192118 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00023187 | lncRNA | upstream | 88088 | 44899541 ~ 44922142 (+) | True | XLOC_011684 |
| TCONS_00023185 | lncRNA | upstream | 175807 | 44780359 ~ 44834423 (+) | False | XLOC_011684 |
| TCONS_00024758 | lncRNA | upstream | 246820 | 44761624 ~ 44763410 (+) | True | XLOC_011683 |
| TCONS_00024757 | lncRNA | upstream | 617443 | 44382333 ~ 44392787 (+) | True | XLOC_011678 |
| TCONS_00024756 | lncRNA | upstream | 747411 | 44258051 ~ 44262819 (+) | True | XLOC_011676 |
| TCONS_00023194 | lncRNA | downstream | 147601 | 45177626 ~ 45180746 (+) | False | XLOC_011687 |
| TCONS_00024759 | lncRNA | downstream | 148774 | 45178799 ~ 45179428 (+) | True | XLOC_011687 |
| TCONS_00024760 | lncRNA | downstream | 163155 | 45193180 ~ 45193936 (+) | False | XLOC_011688 |
| TCONS_00024498 | lncRNA | downstream | 163174 | 45193199 ~ 45200531 (+) | False | XLOC_011688 |
| TCONS_00023195 | lncRNA | downstream | 169527 | 45199552 ~ 45200541 (+) | False | XLOC_011688 |
| TCONS_00023184 | mRNA | upstream | 86569 | 44780166 ~ 44923661 (+) | False | XLOC_011684 |
| TCONS_00023186 | mRNA | upstream | 87809 | 44833834 ~ 44922421 (+) | False | XLOC_011684 |
| TCONS_00023183 | mRNA | upstream | 248650 | 44756247 ~ 44761580 (+) | True | XLOC_011682 |
| TCONS_00023182 | mRNA | upstream | 257791 | 44697604 ~ 44752439 (+) | True | XLOC_011681 |
| TCONS_00023181 | mRNA | upstream | 533518 | 44463230 ~ 44476712 (+) | True | XLOC_011680 |
| TCONS_00023191 | mRNA | downstream | 76399 | 45106424 ~ 45113806 (+) | False | XLOC_011686 |
| TCONS_00023192 | mRNA | downstream | 76501 | 45106526 ~ 45114519 (+) | False | XLOC_011686 |
| TCONS_00023193 | mRNA | downstream | 76681 | 45106706 ~ 45114519 (+) | True | XLOC_011686 |
| TCONS_00023196 | mRNA | downstream | 229234 | 45259259 ~ 45302962 (+) | False | XLOC_011689 |
| TCONS_00023197 | mRNA | downstream | 229245 | 45259270 ~ 45263464 (+) | True | XLOC_011689 |
| TCONS_00023179 | other | upstream | 718710 | 44291405 ~ 44291520 (+) | True | XLOC_011677 |
| TCONS_00023173 | other | upstream | 1068179 | 43941937 ~ 43942051 (+) | True | XLOC_011671 |
| TCONS_00023158 | other | upstream | 1135946 | 43863732 ~ 43874284 (+) | False | XLOC_011668 |
| TCONS_00023133 | other | upstream | 3250305 | 41759808 ~ 41759925 (+) | True | XLOC_011645 |
| TCONS_00023121 | other | upstream | 5224318 | 39785815 ~ 39785912 (+) | True | XLOC_011630 |
| TCONS_00023200 | other | downstream | 366069 | 45396094 ~ 45402959 (+) | True | XLOC_011692 |
| TCONS_00023207 | other | downstream | 442629 | 45472654 ~ 45475249 (+) | False | XLOC_011696 |
| TCONS_00023216 | other | downstream | 609317 | 45639342 ~ 45646531 (+) | True | XLOC_011699 |
| TCONS_00023224 | other | downstream | 717658 | 45747683 ~ 45748668 (+) | False | XLOC_011701 |
| TCONS_00023226 | other | downstream | 778128 | 45808153 ~ 45808248 (+) | True | XLOC_011702 |
