RNA id: TCONS_00024130


Basic Information

Item Value
RNA id TCONS_00024130
length 119
RNA type rRNA
GC content 0.45
exon number 1
gene id XLOC_012246
representative True

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 35617986 ~ 35618104 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGCCACAGCAATATtactctgcagcccaagaccggttactcactgatgataagcagagctgagcctggtcaatacctgaatgggagaccacatgataAAAACCAGGTTAATTTTGGAAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000116637

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00024129 lncRNA downstream 28249 35554571 ~ 35589737 (-) False XLOC_012245
TCONS_00024122 lncRNA downstream 541256 34998971 ~ 35076730 (-) True XLOC_012240
TCONS_00024117 lncRNA downstream 812228 34706779 ~ 34805758 (-) False XLOC_012238
TCONS_00024944 lncRNA downstream 812248 34741156 ~ 34805738 (-) False XLOC_012238
TCONS_00024945 lncRNA downstream 812248 34745456 ~ 34805738 (-) True XLOC_012238
TCONS_00024544 lncRNA upstream 88406 35706510 ~ 35736110 (-) True XLOC_012245
TCONS_00024545 lncRNA upstream 261990 35880094 ~ 35881841 (-) False XLOC_012247
TCONS_00024947 lncRNA upstream 262626 35880730 ~ 35881741 (-) True XLOC_012247
TCONS_00024132 lncRNA upstream 282961 35901065 ~ 35962097 (-) False XLOC_012248
TCONS_00024133 lncRNA upstream 343546 35961650 ~ 36053935 (-) False XLOC_012248
TCONS_00024128 mRNA downstream 256664 35357451 ~ 35361322 (-) True XLOC_012244
TCONS_00024127 mRNA downstream 265296 35285876 ~ 35352690 (-) True XLOC_012243
TCONS_00024126 mRNA downstream 338564 35250157 ~ 35279422 (-) True XLOC_012242
TCONS_00024125 mRNA downstream 339223 35247497 ~ 35278763 (-) False XLOC_012242
TCONS_00024123 mRNA downstream 379627 35225614 ~ 35238359 (-) False XLOC_012241
TCONS_00024131 mRNA upstream 260440 35878544 ~ 35881841 (-) False XLOC_012247
TCONS_00024136 mRNA upstream 865183 36483287 ~ 36483787 (-) False XLOC_012250
TCONS_00024137 mRNA upstream 865289 36483393 ~ 36513936 (-) True XLOC_012250
TCONS_00024138 mRNA upstream 898591 36516695 ~ 36529449 (-) False XLOC_012251
TCONS_00024139 mRNA upstream 898593 36516697 ~ 36529016 (-) True XLOC_012251
TCONS_00024124 other downstream 379674 35228588 ~ 35238312 (-) True XLOC_012241
TCONS_00024114 other downstream 1904809 33699379 ~ 33713177 (-) False XLOC_012236
TCONS_00024113 other downstream 1912522 33691698 ~ 33705464 (-) False XLOC_012236
TCONS_00024101 other downstream 2378700 33238317 ~ 33239286 (-) True XLOC_012231
TCONS_00024095 other downstream 2838544 32774917 ~ 32779442 (-) True XLOC_012226
TCONS_00024140 other upstream 1016968 36635072 ~ 36635189 (-) True XLOC_012252
TCONS_00024159 other upstream 1332334 36950438 ~ 36950555 (-) True XLOC_012260
TCONS_00024168 other upstream 1691225 37309329 ~ 37309446 (-) True XLOC_012265
TCONS_00024169 other upstream 1692558 37310662 ~ 37311810 (-) False XLOC_012266
TCONS_00024174 other upstream 1771899 37390003 ~ 37390117 (-) True XLOC_012269