RNA id: TCONS_00024261



Basic Information


Item Value
RNA id TCONS_00024261
length 117
RNA type rRNA
GC content 0.50
exon number 1
gene id XLOC_012333
representative True

Chromosome Information


Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 44058811 ~ 44058927 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


tgccacagccatatcaccctgcagcccaagaccggttactcactgaaccTAAGCTGGGCTGAACCTGGTCAGTAACTGAATGGGAGACTACATAGAAAAACTAGgatgctgttggaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000190861

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00024258 lncRNA downstream 47929 44004439 ~ 44010882 (-) True XLOC_012332
TCONS_00024259 lncRNA downstream 47986 44004439 ~ 44010825 (-) False XLOC_012332
TCONS_00024260 lncRNA downstream 48587 44004439 ~ 44010224 (-) False XLOC_012332
TCONS_00024255 lncRNA downstream 340416 43708399 ~ 43718395 (-) True XLOC_012330
TCONS_00024980 lncRNA downstream 409317 43641817 ~ 43649494 (-) True XLOC_012328
TCONS_00024981 lncRNA upstream 11414 44070341 ~ 44115968 (-) False XLOC_012334
TCONS_00024262 lncRNA upstream 11414 44070341 ~ 44116077 (-) True XLOC_012334
TCONS_00024982 lncRNA upstream 295897 44354824 ~ 44355986 (-) False XLOC_012336
TCONS_00024266 lncRNA upstream 295897 44354824 ~ 44409623 (-) True XLOC_012336
TCONS_00024983 lncRNA upstream 423160 44482087 ~ 44495323 (-) False XLOC_012339
TCONS_00024256 mRNA downstream 195111 43850516 ~ 43863700 (-) False XLOC_012331
TCONS_00024253 mRNA downstream 381340 43663504 ~ 43677471 (-) False XLOC_012329
TCONS_00024254 mRNA downstream 392645 43663750 ~ 43666166 (-) True XLOC_012329
TCONS_00024252 mRNA downstream 393445 43663504 ~ 43665366 (-) False XLOC_012329
TCONS_00024251 mRNA downstream 435441 43610894 ~ 43623370 (-) True XLOC_012327
TCONS_00024263 mRNA upstream 185732 44244659 ~ 44247707 (-) False XLOC_012335
TCONS_00024264 mRNA upstream 185788 44244715 ~ 44249538 (-) False XLOC_012335
TCONS_00024265 mRNA upstream 187072 44245999 ~ 44249720 (-) True XLOC_012335
TCONS_00024267 mRNA upstream 340433 44399360 ~ 44402713 (-) True XLOC_012337
TCONS_00024268 mRNA upstream 354843 44413770 ~ 44440832 (-) True XLOC_012338
TCONS_00024257 other downstream 195187 43850762 ~ 43863624 (-) True XLOC_012331
TCONS_00024224 other downstream 1215948 42825291 ~ 42842863 (-) True XLOC_012313
TCONS_00024191 other downstream 4417013 39641681 ~ 39641798 (-) True XLOC_012284
TCONS_00024190 other downstream 4526882 39531815 ~ 39531929 (-) True XLOC_012283
TCONS_00024189 other downstream 4909128 39149567 ~ 39149683 (-) True XLOC_012281
TCONS_00024269 other upstream 424563 44483490 ~ 44483617 (-) False XLOC_012339
TCONS_00024283 other upstream 1081402 45140329 ~ 45151793 (-) False XLOC_012349
TCONS_00024305 other upstream 2611080 46670007 ~ 46670103 (-) True XLOC_012361
TCONS_00024306 other upstream 2681279 46740206 ~ 46740303 (-) True XLOC_012364
TCONS_00024308 other upstream 2760821 46819748 ~ 46819845 (-) True XLOC_012370