Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU599 |
| length | 649 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | slc9a7 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 781840 ~ 1244153 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU686 | lncRNA | upstream | 4725 | 967804 ~ 968217 (+) | True | G562 |
| TU675 | lncRNA | upstream | 31397 | 941299 ~ 941545 (+) | True | G551 |
| TU663 | lncRNA | upstream | 32249 | 887311 ~ 940693 (+) | False | G545 |
| TU665 | lncRNA | upstream | 55552 | 910169 ~ 917390 (+) | True | G545 |
| TU670 | lncRNA | upstream | 85303 | 884488 ~ 887639 (+) | True | G546 |
| TU594 | lncRNA | downstream | 231 | 974325 ~ 975999 (+) | False | slc9a7 |
| TU593 | lncRNA | downstream | 1381 | 975475 ~ 1244153 (+) | False | slc9a7 |
| TU596 | lncRNA | downstream | 1381 | 975475 ~ 976109 (+) | True | slc9a7 |
| TU695 | lncRNA | downstream | 13995 | 988089 ~ 1045254 (+) | True | G571 |
| TU709 | lncRNA | downstream | 33288 | 1007382 ~ 1010207 (+) | True | G583 |
| XM_036977980.1 | mRNA | upstream | 833 | 781840 ~ 972109 (+) | False | slc9a7 |
| XM_021602630.2 | mRNA | upstream | 355347 | 602103 ~ 617595 (+) | True | nit2 |
| XM_036977245.1 | mRNA | upstream | 475814 | 439966 ~ 497128 (+) | False | tbc1d23 |
| XM_036978058.1 | mRNA | downstream | 115302 | 1089396 ~ 1133908 (+) | True | tubgcp5 |
| XM_036978346.1 | mRNA | downstream | 199617 | 1173711 ~ 1298805 (+) | False | cyfip1 |
| XM_036978398.1 | mRNA | downstream | 199617 | 1173711 ~ 1299204 (+) | False | cyfip1 |
| XM_036978300.1 | mRNA | downstream | 199617 | 1173711 ~ 1299441 (+) | False | cyfip1 |
| XM_036978109.1 | mRNA | downstream | 199619 | 1173713 ~ 1300624 (+) | False | cyfip1 |
| TU206 | other | upstream | 652968 | 318047 ~ 319974 (+) | False | G166 |
| TU83 | other | upstream | 842679 | 120466 ~ 130263 (+) | True | G51 |
| TU80 | other | upstream | 852635 | 112959 ~ 120307 (+) | True | G50 |
| TU55 | other | upstream | 879224 | 56555 ~ 93718 (+) | True | G26 |
| TU47 | other | upstream | 900643 | 52711 ~ 72299 (+) | True | G19 |
| TU707 | other | downstream | 29689 | 1003783 ~ 1009153 (+) | False | G583 |
| TU710 | other | downstream | 29689 | 1003783 ~ 1010207 (+) | False | G583 |
| TU1201 | other | downstream | 1104804 | 2078898 ~ 2079603 (+) | False | G961 |
| TU1202 | other | downstream | 1104804 | 2078898 ~ 2079603 (+) | False | G961 |
| TU1203 | other | downstream | 1104804 | 2078898 ~ 2079603 (+) | True | G961 |
