Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU3539 |
| length | 699 |
| lncRNA type | read_through |
| GC content | 0.37 |
| exon number | 3 |
| gene id | LOC118964935 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 3291184 ~ 3294574 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU3521 | lncRNA | downstream | 18504 | 3272092 ~ 3275037 (-) | False | G2707 |
| TU3525 | lncRNA | downstream | 18504 | 3274092 ~ 3275037 (-) | True | G2707 |
| TU3520 | lncRNA | downstream | 19505 | 3272092 ~ 3274036 (-) | False | G2707 |
| TU3515 | lncRNA | downstream | 27810 | 3265363 ~ 3265731 (-) | True | G2705 |
| TU3492 | lncRNA | downstream | 82940 | 3208531 ~ 3210601 (-) | True | G2683 |
| TU3540 | lncRNA | upstream | 209 | 3294783 ~ 3295721 (-) | False | G2718 |
| TU3541 | lncRNA | upstream | 209 | 3294783 ~ 3295721 (-) | True | G2718 |
| TU3546 | lncRNA | upstream | 14578 | 3309152 ~ 3309572 (-) | True | G2723 |
| TU3551 | lncRNA | upstream | 23223 | 3317797 ~ 3320269 (-) | True | G2728 |
| TU3552 | lncRNA | upstream | 42821 | 3337395 ~ 3337805 (-) | True | G2729 |
| XM_036989269.1 | mRNA | downstream | 289547 | 3002309 ~ 3003994 (-) | True | LOC118966169 |
| XM_036980806.1 | mRNA | downstream | 478464 | 2636662 ~ 2815077 (-) | False | LOC110523943 |
| XM_036980846.1 | mRNA | downstream | 478464 | 2661728 ~ 2815077 (-) | True | LOC110523943 |
| XM_021615446.2 | mRNA | downstream | 674958 | 2616583 ~ 2618583 (-) | True | LOC110531934 |
| XM_036980621.1 | mRNA | downstream | 816351 | 2462283 ~ 2477190 (-) | True | LOC118964912 |
| XM_036981414.1 | mRNA | upstream | 337764 | 3632338 ~ 3640949 (-) | False | smx5 |
| XM_036981538.1 | mRNA | upstream | 353263 | 3647837 ~ 3700483 (-) | False | inpp5d |
| XM_036981612.1 | mRNA | upstream | 353263 | 3647837 ~ 3700483 (-) | False | inpp5d |
| XR_005052360.1 | mRNA | upstream | 353263 | 3647837 ~ 3700485 (-) | True | inpp5d |
| XR_005052400.1 | mRNA | upstream | 413475 | 3708049 ~ 3720457 (-) | False | LOC118965007 |
| TU3379 | other | downstream | 314625 | 2978615 ~ 2978916 (-) | True | G2605 |
| TU2862 | other | downstream | 549967 | 2742887 ~ 2743574 (-) | True | G2192 |
| TU2559 | other | downstream | 759028 | 2534030 ~ 2534513 (-) | True | G1954 |
| TU2331 | other | downstream | 1196417 | 2092410 ~ 2097124 (-) | True | G1788 |
| TU2151 | other | downstream | 1533111 | 1753245 ~ 1760430 (-) | True | G1651 |
| TU3553 | other | upstream | 45139 | 3339713 ~ 3341868 (-) | True | G2730 |
| TU3579 | other | upstream | 90732 | 3385306 ~ 3388215 (-) | True | G2749 |
| TU3613 | other | upstream | 147764 | 3442338 ~ 3444099 (-) | True | G2772 |
| TU3708 | other | upstream | 337733 | 3632307 ~ 3640893 (-) | True | smx5 |
| TU3986 | other | upstream | 787589 | 4082163 ~ 4121474 (-) | True | LOC110524598 |
