Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU28250 |
| length | 456 |
| lncRNA type | sense_over |
| GC content | 0.36 |
| exon number | 1 |
| gene id | LOC118948024 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 24091604 ~ 24102924 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0090304 | nucleic acid metabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU27590 | lncRNA | downstream | 9668 | 24082092 ~ 24082376 (-) | True | G23940 |
| TU27582 | lncRNA | downstream | 16359 | 24075401 ~ 24075685 (-) | True | G23932 |
| TU27485 | lncRNA | downstream | 176686 | 23915118 ~ 23915358 (-) | True | G23839 |
| TU27484 | lncRNA | downstream | 178937 | 23912882 ~ 23913107 (-) | True | G23838 |
| TU27479 | lncRNA | downstream | 182807 | 23908912 ~ 23909237 (-) | True | G23833 |
| TU28254 | lncRNA | upstream | 4077 | 24096576 ~ 24096892 (-) | True | G24514 |
| TU28255 | lncRNA | upstream | 11049 | 24103548 ~ 24104450 (-) | True | G24515 |
| TU28242 | lncRNA | upstream | 18545 | 24111044 ~ 24112648 (-) | True | G24504 |
| TU28246 | lncRNA | upstream | 24300 | 24116799 ~ 24117790 (-) | True | G24507 |
| TU28316 | lncRNA | upstream | 77834 | 24170333 ~ 24178502 (-) | True | G24550 |
| XM_021592634.2 | mRNA | downstream | 19634 | 24050309 ~ 24072410 (-) | True | uba2 |
| XM_021592683.2 | mRNA | downstream | 42611 | 24034225 ~ 24049433 (-) | True | LOC110512077 |
| XM_036972886.1 | mRNA | downstream | 42614 | 24034225 ~ 24049430 (-) | False | LOC110512077 |
| XM_021592720.2 | mRNA | downstream | 44543 | 24034225 ~ 24047501 (-) | False | LOC110512077 |
| XM_021592581.2 | mRNA | downstream | 76267 | 23981215 ~ 24015777 (-) | True | LOC110511826 |
| XM_021593038.2 | mRNA | upstream | 26725 | 24119224 ~ 24126628 (-) | True | ccdc113 |
| XM_021593323.2 | mRNA | upstream | 140717 | 24233216 ~ 24288176 (-) | True | LOC110513500 |
| XM_021593400.2 | mRNA | upstream | 205199 | 24297698 ~ 24343156 (-) | True | LOC110513605 |
| XM_021593578.2 | mRNA | upstream | 315546 | 24408045 ~ 24410610 (-) | True | LOC110513914 |
| XM_021594017.2 | mRNA | upstream | 459893 | 24552392 ~ 24554074 (-) | False | LOC110514811 |
| TU27396 | other | downstream | 265553 | 23822700 ~ 23826491 (-) | True | LOC110511130 |
| TU26999 | other | downstream | 467695 | 23624026 ~ 23624349 (-) | True | G23394 |
| TU25921 | other | downstream | 1248739 | 22839845 ~ 22843305 (-) | True | G22350 |
| TU25520 | other | downstream | 1709836 | 22381870 ~ 22382208 (-) | True | G21993 |
| TU24399 | other | downstream | 2544271 | 21535933 ~ 21547773 (-) | True | LOC110507736 |
| TU28304 | other | upstream | 130408 | 24222907 ~ 24226490 (-) | True | G24542 |
| TU28501 | other | upstream | 460092 | 24552591 ~ 24553562 (-) | True | LOC110514811 |
| TU28721 | other | upstream | 771588 | 24864087 ~ 24864834 (-) | True | znf276 |
| TU28795 | other | upstream | 835849 | 24928348 ~ 24938701 (-) | False | LOC118956210 |
| TU28762 | other | upstream | 852409 | 24944908 ~ 24951387 (-) | False | LOC110518671 |
