Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021598193.2 |
| length | 1293 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 3 |
| gene id | nr2f2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 29662948 ~ 29672991 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006357 | regulation of transcription by RNA polymerase II | biological_process |
| GO:0043401 | steroid hormone mediated signaling pathway | biological_process |
| GO:0030522 | intracellular receptor signaling pathway | biological_process |
| GO:0001946 | lymphangiogenesis | biological_process |
| GO:0060838 | lymphatic endothelial cell fate commitment | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0004879 | nuclear receptor activity | molecular_function |
| GO:0003707 | steroid hormone receptor activity | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU34786 | lncRNA | downstream | 16478 | 29648401 ~ 29648602 (-) | True | G30514 |
| TU34783 | lncRNA | downstream | 18376 | 29646204 ~ 29646704 (-) | True | G30511 |
| TU34772 | lncRNA | downstream | 24318 | 29640456 ~ 29640762 (-) | True | G30501 |
| TU34747 | lncRNA | downstream | 60932 | 29603947 ~ 29604148 (-) | True | G30476 |
| TU34735 | lncRNA | downstream | 74901 | 29589786 ~ 29590179 (-) | True | G30464 |
| TU34800 | lncRNA | upstream | 1650 | 29674641 ~ 29674871 (-) | True | G30528 |
| TU34803 | lncRNA | upstream | 4149 | 29677140 ~ 29677779 (-) | True | G30531 |
| TU34805 | lncRNA | upstream | 7426 | 29680417 ~ 29680685 (-) | True | G30533 |
| TU34836 | lncRNA | upstream | 53394 | 29726385 ~ 29726600 (-) | True | G30563 |
| TU34855 | lncRNA | upstream | 65001 | 29737992 ~ 29738229 (-) | True | G30582 |
| XR_005041213.1 | mRNA | downstream | 284355 | 29371933 ~ 29380725 (-) | True | LOC118946030 |
| LOC110532163 | mRNA | downstream | 782449 | 28862981 ~ 28882631 (-) | True | LOC110532163 |
| XM_036975282.1 | mRNA | downstream | 822430 | 28835278 ~ 28842650 (-) | True | LOC110520608 |
| XM_021598040.2 | mRNA | downstream | 823115 | 28835278 ~ 28841965 (-) | False | LOC110520608 |
| XM_021598032.2 | mRNA | downstream | 823160 | 28835278 ~ 28841920 (-) | False | LOC110520608 |
| XR_005051428.1 | mRNA | upstream | 605264 | 30278255 ~ 30284238 (-) | True | LOC118964375 |
| XM_021598271.2 | mRNA | upstream | 630628 | 30303619 ~ 30336405 (-) | False | chd2 |
| XM_021598247.2 | mRNA | upstream | 630628 | 30303619 ~ 30336406 (-) | False | chd2 |
| XM_021598280.2 | mRNA | upstream | 630628 | 30303619 ~ 30336406 (-) | False | chd2 |
| XM_021598298.2 | mRNA | upstream | 630628 | 30303619 ~ 30336406 (-) | False | chd2 |
| TU34164 | other | downstream | 384380 | 29280276 ~ 29280700 (-) | True | G29906 |
| TU33578 | other | downstream | 960724 | 28703887 ~ 28704356 (-) | True | G29355 |
| TU33049 | other | downstream | 1598775 | 28057443 ~ 28066305 (-) | True | G28870 |
| TU33047 | other | downstream | 1602630 | 28057443 ~ 28062450 (-) | False | G28870 |
| TU32221 | other | downstream | 2021960 | 27636088 ~ 27643120 (-) | True | LOC110520292 |
| TU37184 | other | upstream | 1458902 | 31131893 ~ 31132891 (-) | True | LOC110520932 |
| TU37405 | other | upstream | 1753132 | 31426123 ~ 31444949 (-) | True | LOC110521048 |
| TU37804 | other | upstream | 2311780 | 31984771 ~ 31986150 (-) | False | G33386 |
| TU39673 | other | upstream | 3434128 | 33107119 ~ 33108497 (-) | True | G35075 |
| TU39914 | other | upstream | 3769377 | 33442368 ~ 33452413 (-) | True | G35299 |
