RNA id: XM_036989454.1



Basic Information


Item Value
RNA id XM_036989454.1
length 411
RNA type mRNA
GC content 0.57
exon number 5
gene id odf3b
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 35286541 ~ 35287452 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TATGCCCCTGCCTCCTCCCTGTCTGCTTGGAGCAAAGGCTTCCACAACGACCAGACCCCAGGCCCTGCTGCTTACATGCAGCCCTCTGTGCTGGGGCCTGCCACCGTCAACAAAACCTCCACCCCTAACTTCTCCCGCCGAGGATGCAGCAAGATGGTCAGTTTCCACGAGGACCTGCAGAAGGTCTCTGGCCCAGGGACATTCAGAGTGGTGGACCCCTGCACCTACAAACAAAAGCCCCCCCACTACAGCATGACAGGATGCAACAGCATGCCTGGAGACACCACCATGAAACGGCCCGGAGCTCACCACCCTGAACAGGTGACCTTCACCAGGATCAAACCTCCAAGCTTCACTTTCAAAATTCATCATTCCGAGTTCATCGCTCCACTCATCGTGGACGTGGTGTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU42058 lncRNA downstream 175246 35110630 ~ 35111295 (-) True G37196
TU42044 lncRNA downstream 195166 35091116 ~ 35091375 (-) True G37184
TU42041 lncRNA downstream 201315 35084985 ~ 35085226 (-) True G37181
TU42040 lncRNA downstream 201621 35084576 ~ 35084920 (-) True G37180
TU42038 lncRNA downstream 203566 35082632 ~ 35082975 (-) True G37178
TU42192 lncRNA upstream 11881 35299333 ~ 35299619 (-) True G37322
TU42193 lncRNA upstream 12726 35300178 ~ 35300431 (-) True G37323
TU42200 lncRNA upstream 25367 35312819 ~ 35313055 (-) True G37329
TU42877 lncRNA upstream 136788 35424240 ~ 35424504 (-) True G37901
TU42857 lncRNA upstream 146342 35433794 ~ 35435084 (-) True LOC110532260
XM_021599989.2 mRNA downstream 724 35281285 ~ 35285817 (-) True LOC110521966
XR_005041872.1 mRNA downstream 418246 34856461 ~ 34868295 (-) True LOC118947385
NM_001124600.1 mRNA downstream 595582 34686750 ~ 34690959 (-) True zp2.3
XM_036976547.1 mRNA downstream 622070 34659087 ~ 34664471 (-) True LOC110521923
XM_036984838.1 mRNA downstream 626388 34647385 ~ 34660153 (-) False cpt1
XM_036973693.1 mRNA upstream 26501 35313953 ~ 35315936 (-) False LOC110520384
XM_036973075.1 mRNA upstream 26501 35313953 ~ 35316025 (-) False LOC110520384
XM_021597707.2 mRNA upstream 26501 35313953 ~ 35316192 (-) True LOC110520384
LOC110532260 mRNA upstream 147343 35434795 ~ 35694776 (-) False LOC110532260
XM_021600073.2 mRNA upstream 455198 35742650 ~ 35749548 (-) False LOC110522006
TU42180 other downstream 8536 35273709 ~ 35278005 (-) True G37310
TU40907 other downstream 905309 34341562 ~ 34381232 (-) True G36196
TU40852 other downstream 923805 34277700 ~ 34362736 (-) True G36141
TU40263 other downstream 1418496 33867558 ~ 33868045 (-) True G35628
TU39914 other downstream 1834128 33442368 ~ 33452413 (-) True G35299
TU42883 other upstream 153466 35440918 ~ 35441328 (-) True G37907
TU42957 other upstream 295840 35583292 ~ 35583608 (-) True G37976
TU43028 other upstream 433988 35721440 ~ 35722056 (-) True G38045
TU43851 other upstream 1082642 36370094 ~ 36409019 (-) True LOC110522187
TU43930 other upstream 1221086 36508538 ~ 36510829 (-) True G38855

Expression Profile