Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU54641 |
| length | 901 |
| RNA type | TUCP |
| GC content | 0.37 |
| exon number | 2 |
| gene id | LOC110523657 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 45071354 ~ 45072433 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0016757 | transferase activity, transferring glycosyl groups | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU54628 | lncRNA | upstream | 6701 | 45064417 ~ 45064653 (+) | True | G48896 |
| TU53711 | lncRNA | upstream | 158121 | 44913009 ~ 44913233 (+) | True | G48039 |
| TU53706 | lncRNA | upstream | 165330 | 44905805 ~ 44906024 (+) | True | G48035 |
| TU53704 | lncRNA | upstream | 168564 | 44902553 ~ 44902790 (+) | True | G48033 |
| TU53681 | lncRNA | upstream | 225979 | 44845119 ~ 44845375 (+) | True | G48010 |
| TU54647 | lncRNA | downstream | 478 | 45072907 ~ 45073111 (+) | True | G48912 |
| TU54648 | lncRNA | downstream | 754 | 45073183 ~ 45073507 (+) | True | G48913 |
| TU54655 | lncRNA | downstream | 5942 | 45078371 ~ 45078666 (+) | True | G48920 |
| TU54728 | lncRNA | downstream | 73032 | 45145461 ~ 45146209 (+) | False | G48976 |
| TU54727 | lncRNA | downstream | 73177 | 45145606 ~ 45146209 (+) | False | G48976 |
| XM_036978259.1 | mRNA | upstream | 8920 | 44961201 ~ 45062434 (+) | False | galnt18a |
| XM_036978266.1 | mRNA | upstream | 8920 | 44961204 ~ 45062434 (+) | True | galnt18a |
| XM_036978276.1 | mRNA | upstream | 9478 | 44961203 ~ 45061876 (+) | False | galnt18a |
| XM_036978252.1 | mRNA | upstream | 184396 | 44856908 ~ 44886958 (+) | False | vac14 |
| XM_036978250.1 | mRNA | upstream | 184396 | 44856910 ~ 44886958 (+) | False | vac14 |
| XM_021602640.2 | mRNA | downstream | 20553 | 45092982 ~ 45115348 (+) | False | LOC110523687 |
| XM_021602615.2 | mRNA | downstream | 20555 | 45092984 ~ 45115348 (+) | False | LOC110523687 |
| XM_021602621.2 | mRNA | downstream | 21445 | 45093874 ~ 45115348 (+) | False | LOC110523687 |
| XM_021602631.2 | mRNA | downstream | 29658 | 45102087 ~ 45115348 (+) | True | LOC110523687 |
| XM_021602869.2 | mRNA | downstream | 355241 | 45427670 ~ 45446413 (+) | False | LOC110523812 |
| TU53576 | other | upstream | 280264 | 44789630 ~ 44791090 (+) | True | G47910 |
| TU53574 | other | upstream | 323349 | 44720705 ~ 44748005 (+) | True | e2f4 |
| TU53309 | other | upstream | 927638 | 44139091 ~ 44143716 (+) | True | G47667 |
| TU53233 | other | upstream | 1023343 | 44044670 ~ 44048011 (+) | False | G47595 |
| TU53083 | other | upstream | 1268391 | 43802513 ~ 43802963 (+) | True | G47467 |
| TU54725 | other | downstream | 72849 | 45145278 ~ 45146133 (+) | False | G48976 |
| TU54730 | other | downstream | 72849 | 45145278 ~ 45146640 (+) | False | G48976 |
| TU54914 | other | downstream | 342277 | 45414706 ~ 45418180 (+) | True | G49142 |
| TU55125 | other | downstream | 662624 | 45735053 ~ 45736780 (+) | True | G49335 |
| TU55851 | other | downstream | 919844 | 45992273 ~ 45992891 (+) | False | G50010 |
