Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021602822.2 |
| length | 3554 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 22 |
| gene id | LOC110523755 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 45325909 ~ 45414664 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|---|
| K19947 | MICAL; F-actin monooxygenase |
45,290,000
45,300,000
45,310,000
45,320,000
45,330,000
45,340,000
45,350,000
45,360,000
45,360,000
45,370,000
45,380,000
45,390,000
45,400,000
45,410,000
45,420,000
45,430,000
NC_048565.1
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| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU55372 | lncRNA | downstream | 7520 | 45338855 ~ 45339150 (-) | True | G49555 |
| TU55256 | lncRNA | downstream | 22098 | 45323205 ~ 45324572 (-) | False | G49456 |
| TU55257 | lncRNA | downstream | 22098 | 45323340 ~ 45324572 (-) | True | G49456 |
| TU55339 | lncRNA | downstream | 95457 | 45250943 ~ 45251213 (-) | True | LOC110523718 |
| TU55326 | lncRNA | downstream | 102677 | 45243773 ~ 45243993 (-) | True | G49524 |
| TU55261 | lncRNA | upstream | 21026 | 45435672 ~ 45451731 (-) | True | G49459 |
| TU55440 | lncRNA | upstream | 61917 | 45476563 ~ 45479422 (-) | False | G49619 |
| TU55445 | lncRNA | upstream | 62044 | 45476690 ~ 45479422 (-) | True | G49619 |
| TU55595 | lncRNA | upstream | 284510 | 45699156 ~ 45699878 (-) | True | G49759 |
| TU55613 | lncRNA | upstream | 309513 | 45724159 ~ 45724388 (-) | True | G49777 |
| XM_021602711.2 | mRNA | downstream | 24999 | 45304638 ~ 45321671 (-) | True | parvaa |
| XM_021602721.2 | mRNA | downstream | 26618 | 45304638 ~ 45320052 (-) | False | parvaa |
| XM_021602672.2 | mRNA | downstream | 46799 | 45257236 ~ 45299871 (-) | False | LOC110523724 |
| LOC118964648 | mRNA | upstream | 62007 | 45476653 ~ 45477841 (-) | True | LOC118964648 |
| XR_005051867.1 | mRNA | upstream | 62007 | 45476653 ~ 45539251 (-) | False | LOC110523834 |
| XR_005051865.1 | mRNA | upstream | 62007 | 45476653 ~ 45539253 (-) | False | LOC110523834 |
| XR_005051868.1 | mRNA | upstream | 62007 | 45476653 ~ 45549871 (-) | False | LOC110523834 |
| XR_005051866.1 | mRNA | upstream | 62007 | 45476653 ~ 45587077 (-) | False | LOC110523834 |
| TU52237 | other | downstream | 2217641 | 43038728 ~ 43129029 (-) | True | tspan9a |
| TU47067 | other | downstream | 6324645 | 39021805 ~ 39022025 (-) | True | G41868 |
| TU45924 | other | downstream | 7154934 | 38187488 ~ 38191736 (-) | True | G40768 |
| TU45886 | other | downstream | 7220945 | 38125280 ~ 38125725 (-) | True | G40732 |
| TU45214 | other | downstream | 7629637 | 37716540 ~ 37717033 (-) | True | G40079 |
| TU55610 | other | upstream | 306159 | 45720805 ~ 45721124 (-) | True | G49774 |
| TU55801 | other | upstream | 534312 | 45948958 ~ 45949951 (-) | True | G49962 |
| TU57229 | other | upstream | 1650128 | 47064774 ~ 47119033 (-) | False | G51214 |
| TU57327 | other | upstream | 1874293 | 47288939 ~ 47289681 (-) | True | G51285 |
| TU57725 | other | upstream | 1962995 | 47377641 ~ 47378543 (-) | True | G51649 |
