Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021605572.2 |
| length | 1899 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 8 |
| gene id | tspan18b |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 54593203 ~ 54716059 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
54,568,000
54,572,000
54,576,000
54,580,000
54,584,000
54,588,000
54,592,000
54,596,000
54,600,000
54,604,000
54,608,000
54,612,000
54,616,000
54,620,000
54,624,000
54,628,000
54,632,000
NC_048565.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU66446 | lncRNA | downstream | 134284 | 54394044 ~ 54458919 (-) | True | G59794 |
| TU66362 | lncRNA | downstream | 295915 | 54279232 ~ 54297288 (-) | False | G59721 |
| TU66361 | lncRNA | downstream | 295915 | 54295267 ~ 54297288 (-) | True | G59721 |
| TU66360 | lncRNA | downstream | 333290 | 54255010 ~ 54259913 (-) | True | G59720 |
| TU66253 | lncRNA | downstream | 369378 | 54192261 ~ 54223825 (-) | True | LOC110525336 |
| TU66618 | lncRNA | upstream | 75182 | 54699082 ~ 54705581 (-) | True | G59956 |
| TU66619 | lncRNA | upstream | 80730 | 54704630 ~ 54711130 (-) | True | G59957 |
| TU66621 | lncRNA | upstream | 93567 | 54717467 ~ 54717739 (-) | True | G59959 |
| TU66627 | lncRNA | upstream | 96878 | 54720778 ~ 54721359 (-) | True | G59965 |
| TU66628 | lncRNA | upstream | 97511 | 54721411 ~ 54721732 (-) | True | G59966 |
| XM_036980538.1 | mRNA | downstream | 22905 | 54504696 ~ 54570298 (-) | False | caprin1b |
| XM_036980569.1 | mRNA | downstream | 22905 | 54504696 ~ 54570298 (-) | True | caprin1b |
| XM_036980550.1 | mRNA | downstream | 33755 | 54504696 ~ 54559448 (-) | False | caprin1b |
| XM_036980570.1 | mRNA | downstream | 50773 | 54504696 ~ 54542430 (-) | False | caprin1b |
| XM_036980545.1 | mRNA | downstream | 50775 | 54504696 ~ 54542428 (-) | False | caprin1b |
| XM_036980597.1 | mRNA | upstream | 206926 | 54830826 ~ 54871653 (-) | False | LOC110525455 |
| XM_036980594.1 | mRNA | upstream | 206926 | 54830826 ~ 54872325 (-) | True | LOC110525455 |
| XM_021605592.2 | mRNA | upstream | 281457 | 54905357 ~ 54934644 (-) | True | LOC110525462 |
| XR_005052177.1 | mRNA | upstream | 339556 | 54963456 ~ 54966553 (-) | True | LOC110525471 |
| XR_005052176.1 | mRNA | upstream | 355011 | 54978911 ~ 55034259 (-) | True | LOC118964914 |
| TU65545 | other | downstream | 796189 | 53791830 ~ 53797014 (-) | True | G58958 |
| TU65542 | other | downstream | 830307 | 53761955 ~ 53762896 (-) | True | LOC110525178 |
| TU65415 | other | downstream | 1004433 | 53588422 ~ 53588770 (-) | True | G58842 |
| TU65285 | other | downstream | 1166887 | 53425964 ~ 53426316 (-) | True | G58718 |
| TU65227 | other | downstream | 1254816 | 53336609 ~ 53338387 (-) | True | LOC110525078 |
| TU66641 | other | upstream | 105231 | 54729131 ~ 54737244 (-) | True | G59978 |
| TU67198 | other | upstream | 446492 | 55070392 ~ 55070899 (-) | True | G60516 |
| TU67257 | other | upstream | 526341 | 55150241 ~ 55154258 (-) | True | G60572 |
| TU67299 | other | upstream | 569397 | 55193297 ~ 55193723 (-) | True | G60614 |
| TU67309 | other | upstream | 579517 | 55203417 ~ 55203742 (-) | True | G60624 |
