Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU72826 |
| length | 594 |
| lncRNA type | sense_over |
| GC content | 0.54 |
| exon number | 5 |
| gene id | spef1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 59310306 ~ 59318124 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU72477 | lncRNA | downstream | 5385 | 59304846 ~ 59305177 (-) | True | G65433 |
| TU72464 | lncRNA | downstream | 27965 | 59282324 ~ 59282597 (-) | True | G65420 |
| TU72463 | lncRNA | downstream | 28373 | 59281990 ~ 59282189 (-) | True | G65419 |
| TU72412 | lncRNA | downstream | 42178 | 59179972 ~ 59268384 (-) | True | G65373 |
| TU72440 | lncRNA | downstream | 81822 | 59227958 ~ 59228740 (-) | True | G65397 |
| TU72833 | lncRNA | upstream | 7683 | 59320049 ~ 59320271 (-) | True | G65743 |
| TU72834 | lncRNA | upstream | 12270 | 59324636 ~ 59325294 (-) | True | G65744 |
| TU72835 | lncRNA | upstream | 13484 | 59325850 ~ 59326050 (-) | True | G65745 |
| TU72836 | lncRNA | upstream | 14782 | 59327148 ~ 59327476 (-) | True | G65746 |
| TU72837 | lncRNA | upstream | 15629 | 59327995 ~ 59328273 (-) | True | G65747 |
| XM_021606138.2 | mRNA | downstream | 62052 | 59212580 ~ 59248510 (-) | True | LOC110525737 |
| XM_021606148.2 | mRNA | downstream | 75929 | 59212580 ~ 59234633 (-) | False | LOC110525737 |
| XM_021606110.2 | mRNA | downstream | 111092 | 59149641 ~ 59199470 (-) | False | LOC110525695 |
| XM_021606236.2 | mRNA | upstream | 29956 | 59342322 ~ 59348237 (-) | False | fuom |
| XM_021606228.2 | mRNA | upstream | 29964 | 59342330 ~ 59348236 (-) | True | fuom |
| XM_021606248.2 | mRNA | upstream | 37190 | 59349556 ~ 59368121 (-) | True | echs1 |
| XM_036981062.1 | mRNA | upstream | 67446 | 59379812 ~ 59396461 (-) | False | mtg1 |
| XM_021606260.2 | mRNA | upstream | 67446 | 59379812 ~ 59398680 (-) | True | mtg1 |
| TU72370 | other | downstream | 155417 | 59144373 ~ 59155145 (-) | True | LOC110525695 |
| TU72149 | other | downstream | 524945 | 58784742 ~ 58785617 (-) | True | G65147 |
| TU70239 | other | downstream | 1912074 | 57397194 ~ 57398488 (-) | True | G63328 |
| TU70000 | other | downstream | 2247714 | 57035667 ~ 57062848 (-) | False | G63093 |
| TU74240 | other | upstream | 1117841 | 60430207 ~ 60461234 (-) | True | LOC110526097 |
| TU76069 | other | upstream | 2369912 | 61682278 ~ 61686308 (-) | True | G68736 |
| TU76326 | other | upstream | 2669365 | 61981731 ~ 61982395 (-) | True | LOC110526417 |
| TU76624 | other | upstream | 3099156 | 62411522 ~ 62418296 (-) | True | G69210 |
| TU77510 | other | upstream | 3964842 | 63277208 ~ 63277752 (-) | True | G70013 |
