RNA id: NM_001124310.1



Basic Information


Item Value
RNA id NM_001124310.1
length 454
RNA type mRNA
GC content 0.49
exon number 3
gene id wu:fj16a03
representative False

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 66014081 ~ 66019044 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TATTCGCTGCTAAGAGAAGTCTTCGACTGAGACCAACAATGAGAGCCTACCTGGTCCTGCTTCTGCTGCTCCCTCTCTGCACAGCCGACTACAACATTGAATGTTACGGCGAGGACTTCCTGATGCTGAGGAACCAGCTCCTACAGTGCTCAAGCAGAACACAGCAGGCCTGCTACACCAGGAAGACTGGGGAGAAGGGCTGTGCTCGGCTGGAGTTGTGCTCTCGATCAGGCTGGAAGTGCTGCTATGAGGACCGCTGCAATGCCTAGAGCTGATTCCAGGGGACACTAACTCCACGGCCCAGGAAAGGCAGAGGACGAAGAGCTGTGATATCAGCCGACAGCAATTTGCTGTTTAGCACTTGGTGAATGGAATGTGTTTGTATAAATAACGTGACAAAAATAACTTTAATTTGATGTAAAGTCACATGAAATAAAGTCCTACGAAATTGTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU81040 lncRNA upstream 845 66012877 ~ 66013340 (+) True G73311
TU81063 lncRNA upstream 7947 66006033 ~ 66006238 (+) True G73334
TU81050 lncRNA upstream 32293 65981669 ~ 65981892 (+) True G73321
TU80653 lncRNA upstream 182577 65831379 ~ 65831608 (+) True G72960
TU80643 lncRNA upstream 207900 65805959 ~ 65806285 (+) True G72954
TU81225 lncRNA downstream 234083 66253121 ~ 66253342 (+) True G73488
TU81229 lncRNA downstream 237056 66256094 ~ 66256316 (+) True G73492
TU81233 lncRNA downstream 242056 66261094 ~ 66261593 (+) True G73496
TU81238 lncRNA downstream 249547 66268585 ~ 66268984 (+) True G73501
TU81264 lncRNA downstream 292428 66311466 ~ 66347388 (+) True G73526
XM_021608317.2 mRNA upstream 10845 66000257 ~ 66003340 (+) True LOC110527177
XM_036989801.1 mRNA upstream 14337 65993868 ~ 65999848 (+) True LOC110532572
XM_021608309.2 mRNA upstream 91900 65915581 ~ 65922285 (+) False LOC110527164
XM_021608300.2 mRNA upstream 102650 65898427 ~ 65911535 (+) True LOC110527154
XM_021608290.2 mRNA upstream 185442 65826347 ~ 65828743 (+) True hcar1-3
XM_021599594.2 mRNA downstream 332373 66351411 ~ 66355894 (+) True prph2b
XR_005052559.1 mRNA downstream 398457 66417495 ~ 66422887 (+) False LOC118965274
XM_021608422.2 mRNA downstream 531225 66550263 ~ 66567928 (+) False LOC110527255
XM_021608430.2 mRNA downstream 531225 66550263 ~ 66567928 (+) False LOC110527255
XM_021608439.2 mRNA downstream 531227 66550265 ~ 66567928 (+) False LOC110527255
TU80728 other upstream 91900 65915735 ~ 65922285 (+) False LOC110527164
TU80729 other upstream 91900 65915735 ~ 65922285 (+) True LOC110527164
TU79281 other upstream 1112561 64809589 ~ 64901624 (+) True LOC110526969
TU77508 other upstream 2738889 63274963 ~ 63275296 (+) True G70011
TU75188 other upstream 4280797 61729765 ~ 61733388 (+) True G67930
TU81252 other downstream 268641 66287679 ~ 66288469 (+) True G73515
TU81346 other downstream 401457 66420495 ~ 66424081 (+) True LOC118965274
TU81852 other downstream 737169 66756207 ~ 66758984 (+) True G74067
TU81938 other downstream 765297 66784335 ~ 66784969 (+) True G74139
TU83729 other downstream 2355467 68374505 ~ 68374929 (+) True G75747

Expression Profile