Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021608693.2 |
| length | 982 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 4 |
| gene id | dnph1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 66957113 ~ 66958777 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0009116 | nucleoside metabolic process | biological_process |
| GO:0009117 | nucleotide metabolic process | biological_process |
| GO:0009159 | deoxyribonucleoside monophosphate catabolic process | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0050144 | nucleoside deoxyribosyltransferase activity | molecular_function |
| GO:0070694 | deoxyribonucleoside 5'-monophosphate N-glycosidase activity | molecular_function |
| id | description |
|---|---|
| K22928 | DNPH1; 2'-deoxynucleoside 5'-phosphate N-hydrolase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU82289 | lncRNA | downstream | 73426 | 66843366 ~ 66883687 (-) | True | tjap1 |
| TU82286 | lncRNA | downstream | 168911 | 66787911 ~ 66788202 (-) | True | G74445 |
| TU82226 | lncRNA | downstream | 222466 | 66663962 ~ 66734647 (-) | True | G74386 |
| TU82222 | lncRNA | downstream | 235570 | 66647427 ~ 66721543 (-) | True | G74382 |
| TU82254 | lncRNA | downstream | 274795 | 66680072 ~ 66682318 (-) | True | G74414 |
| TU82391 | lncRNA | upstream | 80491 | 67039268 ~ 67096685 (-) | True | si:dkeyp-121d4.3 |
| TU82566 | lncRNA | upstream | 266625 | 67225402 ~ 67225691 (-) | True | G74688 |
| TU82570 | lncRNA | upstream | 277339 | 67236116 ~ 67236327 (-) | True | G74692 |
| TU82571 | lncRNA | upstream | 278332 | 67237109 ~ 67237567 (-) | True | G74693 |
| TU82577 | lncRNA | upstream | 312957 | 67271734 ~ 67271956 (-) | True | G74699 |
| XM_036983168.1 | mRNA | downstream | 73382 | 66812312 ~ 66883731 (-) | False | tjap1 |
| XM_036983173.1 | mRNA | downstream | 73382 | 66812312 ~ 66883731 (-) | False | tjap1 |
| XM_036983185.1 | mRNA | downstream | 73383 | 66806836 ~ 66883730 (-) | False | tjap1 |
| XM_036983179.1 | mRNA | downstream | 73383 | 66812312 ~ 66883730 (-) | False | tjap1 |
| XM_036983163.1 | mRNA | downstream | 73384 | 66812312 ~ 66883729 (-) | False | tjap1 |
| XM_021608706.2 | mRNA | upstream | 6887 | 66965664 ~ 67010646 (-) | False | LOC110527436 |
| XM_021608714.2 | mRNA | upstream | 6887 | 66965664 ~ 67010646 (-) | False | LOC110527436 |
| XM_021608727.2 | mRNA | upstream | 55688 | 67014465 ~ 67038832 (-) | False | znf318 |
| XR_002474136.2 | mRNA | upstream | 55688 | 67014465 ~ 67038832 (-) | False | znf318 |
| XR_002474137.2 | mRNA | upstream | 55688 | 67014465 ~ 67038832 (-) | True | znf318 |
| TU82292 | other | downstream | 134297 | 66818844 ~ 66822816 (-) | False | tjap1 |
| TU78947 | other | downstream | 2575757 | 64369902 ~ 64381356 (-) | True | LOC110526867 |
| TU77510 | other | downstream | 3679361 | 63277208 ~ 63277752 (-) | True | G70013 |
| TU76624 | other | downstream | 4538817 | 62411522 ~ 62418296 (-) | True | G69210 |
| TU76326 | other | downstream | 4974718 | 61981731 ~ 61982395 (-) | True | LOC110526417 |
| TU82368 | other | upstream | 35905 | 66994682 ~ 67010587 (-) | True | LOC110527436 |
| TU83185 | other | upstream | 427732 | 67386509 ~ 67388044 (-) | True | LOC110527584 |
| TU83338 | other | upstream | 710812 | 67669589 ~ 67681730 (-) | False | LOC110527687 |
| TU83339 | other | upstream | 710812 | 67669589 ~ 67681730 (-) | True | LOC110527687 |
| TU83574 | other | upstream | 1199184 | 68157961 ~ 68162002 (-) | True | sdhaf4 |
