Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU96049 |
| length | 867 |
| lncRNA type | sense_over |
| GC content | 0.41 |
| exon number | 1 |
| gene id | LOC110529957 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 77535519 ~ 77542730 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0021661 | rhombomere 4 morphogenesis | biological_process |
| GO:0042573 | retinoic acid metabolic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | molecular_function |
| GO:0004497 | monooxygenase activity | molecular_function |
| GO:0005506 | iron ion binding | molecular_function |
| GO:0020037 | heme binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU96029 | lncRNA | downstream | 19352 | 77517445 ~ 77517657 (-) | True | G87113 |
| TU96027 | lncRNA | downstream | 23023 | 77513317 ~ 77513986 (-) | True | G87111 |
| TU96016 | lncRNA | downstream | 43640 | 77493136 ~ 77493369 (-) | True | G87100 |
| TU96009 | lncRNA | downstream | 53083 | 77482511 ~ 77483926 (-) | True | G87093 |
| TU96001 | lncRNA | downstream | 63642 | 77471489 ~ 77473367 (-) | True | G87085 |
| TU96057 | lncRNA | upstream | 7305 | 77545180 ~ 77545382 (-) | True | G87140 |
| TU96058 | lncRNA | upstream | 7526 | 77545401 ~ 77545633 (-) | True | G87141 |
| TU96252 | lncRNA | upstream | 31454 | 77569329 ~ 77570010 (-) | True | G87322 |
| TU96295 | lncRNA | upstream | 108046 | 77645921 ~ 77647885 (-) | True | G87363 |
| TU96297 | lncRNA | upstream | 112087 | 77649962 ~ 77650213 (-) | True | G87365 |
| XM_021612639.2 | mRNA | downstream | 1552 | 77526431 ~ 77535457 (-) | True | LOC110529949 |
| XM_021612603.2 | mRNA | downstream | 49822 | 77484619 ~ 77487187 (-) | True | LOC110529928 |
| XM_021612577.2 | mRNA | downstream | 76349 | 77453710 ~ 77460660 (-) | True | rtkn2a |
| XM_021612553.2 | mRNA | downstream | 180228 | 77352007 ~ 77356781 (-) | True | tmem26a |
| XM_036985839.1 | mRNA | downstream | 223209 | 77148371 ~ 77313800 (-) | True | LOC110529831 |
| XM_021612662.2 | mRNA | upstream | 69044 | 77606919 ~ 77623628 (-) | True | tbc1d12a |
| XM_021612720.2 | mRNA | upstream | 158032 | 77695907 ~ 77735548 (-) | True | LOC110529991 |
| XM_036989897.1 | mRNA | upstream | 228069 | 77765944 ~ 77782971 (-) | True | sh2d4ba |
| XM_036986107.1 | mRNA | upstream | 386661 | 77924536 ~ 78308976 (-) | False | LOC110529998 |
| XM_036986111.1 | mRNA | upstream | 386661 | 77924536 ~ 78308978 (-) | True | LOC110529998 |
| TU96006 | other | downstream | 57070 | 77478603 ~ 77479939 (-) | True | G87090 |
| TU95290 | other | downstream | 669411 | 76866904 ~ 76867598 (-) | True | G86448 |
| TU94946 | other | downstream | 928655 | 76606682 ~ 76608354 (-) | True | G86132 |
| TU94870 | other | downstream | 1013528 | 76521085 ~ 76523481 (-) | True | G86063 |
| TU94594 | other | downstream | 1137053 | 76367293 ~ 76399956 (-) | True | ccser2a |
| TU98450 | other | upstream | 1511936 | 79049811 ~ 79050491 (-) | True | G89418 |
| TU99200 | other | upstream | 1996883 | 79534758 ~ 79535572 (-) | True | G90081 |
| TU99325 | other | upstream | 2345662 | 79883537 ~ 79897840 (-) | True | LOC110530200 |
| TU99326 | other | upstream | 2348800 | 79886675 ~ 79888180 (-) | True | G90190 |
| TU99544 | other | upstream | 2603684 | 80141559 ~ 80142157 (-) | True | G90382 |
