Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC110530025 |
| length | 451 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 1 |
| gene id | LOC110530025 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 79044586 ~ 79045036 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU98093 | lncRNA | upstream | 41927 | 79001299 ~ 79002659 (+) | True | G89077 |
| TU97719 | lncRNA | upstream | 159629 | 78884512 ~ 78884957 (+) | True | G88738 |
| TU97696 | lncRNA | upstream | 180217 | 78862986 ~ 78864369 (+) | True | G88716 |
| TU97557 | lncRNA | upstream | 361336 | 78682967 ~ 78683250 (+) | True | G88580 |
| TU97523 | lncRNA | upstream | 406447 | 78636321 ~ 78638139 (+) | True | G88546 |
| TU98058 | lncRNA | downstream | 37535 | 79082571 ~ 79083009 (+) | True | G89048 |
| TU98143 | lncRNA | downstream | 63762 | 79108798 ~ 79109351 (+) | True | G89127 |
| TU98210 | lncRNA | downstream | 146280 | 79191316 ~ 79192045 (+) | True | G89192 |
| TU98157 | lncRNA | downstream | 164832 | 79209868 ~ 79212501 (+) | True | G89140 |
| TU98214 | lncRNA | downstream | 182198 | 79227234 ~ 79227545 (+) | True | G89196 |
| XM_036986123.1 | mRNA | upstream | 419231 | 78541593 ~ 78625355 (+) | False | LOC110530007 |
| XM_021612760.2 | mRNA | upstream | 419231 | 78541606 ~ 78625355 (+) | True | LOC110530007 |
| XR_005051578.1 | mRNA | upstream | 515172 | 78526692 ~ 78529414 (+) | False | LOC118964520 |
| XR_005051567.1 | mRNA | upstream | 613472 | 78430195 ~ 78431114 (+) | True | LOC118964491 |
| XM_036986097.1 | mRNA | upstream | 1280958 | 77752766 ~ 77763628 (+) | True | LOC110529992 |
| XM_021612840.2 | mRNA | downstream | 12632 | 79057668 ~ 79080264 (+) | False | cfap36 |
| XM_021612847.2 | mRNA | downstream | 12944 | 79057980 ~ 79080540 (+) | False | cfap36 |
| XM_021612856.2 | mRNA | downstream | 12945 | 79057981 ~ 79080261 (+) | False | cfap36 |
| XM_021612864.2 | mRNA | downstream | 12948 | 79057984 ~ 79080540 (+) | True | cfap36 |
| XM_036986199.1 | mRNA | downstream | 81769 | 79126805 ~ 79207400 (+) | False | LOC110530085 |
| TU96076 | other | upstream | 1474116 | 77570015 ~ 77570470 (+) | True | G87159 |
| TU95475 | other | upstream | 1920159 | 77123935 ~ 77124427 (+) | True | G86614 |
| TU94822 | other | upstream | 2408650 | 76631745 ~ 76635936 (+) | True | G86019 |
| TU94291 | other | upstream | 2584763 | 76458124 ~ 76459823 (+) | True | LOC110529610 |
| TU92648 | other | upstream | 3899074 | 75144864 ~ 75145512 (+) | True | G83979 |
| TU98716 | other | downstream | 503981 | 79549017 ~ 79549651 (+) | True | G89667 |
| TU98806 | other | downstream | 706737 | 79751773 ~ 79765359 (+) | True | acoxl |
| TU100301 | other | downstream | 1720078 | 80765114 ~ 80766155 (+) | True | G91064 |
| TU100812 | other | downstream | 2493295 | 81538331 ~ 81541400 (+) | False | G91541 |
| TU101077 | other | downstream | 2832503 | 81877539 ~ 81879178 (+) | True | G91779 |
