Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC110532764 |
| length | 484 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 4 |
| gene id | LOC110532764 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 81787863 ~ 81790971 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006396 | RNA processing | biological_process |
| GO:0001510 | RNA methylation | biological_process |
| GO:0008173 | RNA methyltransferase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU101016 | lncRNA | upstream | 9686 | 81777781 ~ 81778177 (+) | True | G91721 |
| TU101005 | lncRNA | upstream | 50159 | 81737502 ~ 81737704 (+) | True | G91710 |
| TU101004 | lncRNA | upstream | 51332 | 81736323 ~ 81736531 (+) | True | G91709 |
| TU101001 | lncRNA | upstream | 54564 | 81732862 ~ 81733299 (+) | True | G91706 |
| TU101000 | lncRNA | upstream | 55202 | 81732368 ~ 81732661 (+) | True | G91705 |
| TU101027 | lncRNA | downstream | 10580 | 81801551 ~ 81801784 (+) | True | G91731 |
| TU101035 | lncRNA | downstream | 22872 | 81813843 ~ 81814164 (+) | True | G91738 |
| TU101040 | lncRNA | downstream | 43185 | 81834156 ~ 81884237 (+) | False | LOC110530514 |
| TU101039 | lncRNA | downstream | 43663 | 81834634 ~ 81835118 (+) | True | LOC110530514 |
| TU101071 | lncRNA | downstream | 76484 | 81867455 ~ 81874732 (+) | True | G91773 |
| XM_021613590.2 | mRNA | upstream | 10862 | 81775161 ~ 81777001 (+) | True | LOC110530482 |
| XM_021613537.2 | mRNA | upstream | 142445 | 81641973 ~ 81645418 (+) | True | tysnd1 |
| XM_021613563.2 | mRNA | upstream | 146065 | 81635394 ~ 81641798 (+) | True | LOC110530473 |
| XM_036952491.1 | mRNA | upstream | 152841 | 81620220 ~ 81635022 (+) | False | ipyr |
| NM_001165208.2 | mRNA | upstream | 152849 | 81620265 ~ 81635014 (+) | True | ipyr |
| XM_021613655.2 | mRNA | downstream | 12843 | 81803814 ~ 81812914 (+) | False | scdb |
| XM_021613625.2 | mRNA | downstream | 12844 | 81803815 ~ 81812914 (+) | False | scdb |
| XM_021613632.2 | mRNA | downstream | 12844 | 81803815 ~ 81812914 (+) | False | scdb |
| XM_021613640.2 | mRNA | downstream | 12844 | 81803815 ~ 81812914 (+) | False | scdb |
| XM_021613648.2 | mRNA | downstream | 12844 | 81803815 ~ 81812914 (+) | False | scdb |
| TU100812 | other | upstream | 246463 | 81538331 ~ 81541400 (+) | False | G91541 |
| TU100301 | other | upstream | 1021708 | 80765114 ~ 80766155 (+) | True | G91064 |
| TU98806 | other | upstream | 2022504 | 79751773 ~ 79765359 (+) | True | acoxl |
| TU98716 | other | upstream | 2238212 | 79549017 ~ 79549651 (+) | True | G89667 |
| TU96076 | other | upstream | 4217393 | 77570015 ~ 77570470 (+) | True | G87159 |
| TU101077 | other | downstream | 86568 | 81877539 ~ 81879178 (+) | True | G91779 |
| TU101096 | other | downstream | 115161 | 81906132 ~ 81907395 (+) | True | LOC110530526 |
| TU101849 | other | downstream | 337673 | 82128644 ~ 82148774 (+) | False | LOC110530572 |
| TU101852 | other | downstream | 337673 | 82128644 ~ 82145474 (+) | False | LOC110530572 |
| TU101853 | other | downstream | 337673 | 82128644 ~ 82145452 (+) | False | LOC110530572 |
