Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU107580 |
| length | 336 |
| lncRNA type | sense_over |
| GC content | 0.46 |
| exon number | 2 |
| gene id | LOC110518258 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 86783824 ~ 86864120 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU107576 | lncRNA | downstream | 17968 | 86765724 ~ 86765985 (-) | True | G97290 |
| TU107573 | lncRNA | downstream | 23124 | 86760188 ~ 86760829 (-) | True | G97287 |
| TU107571 | lncRNA | downstream | 26592 | 86757060 ~ 86757361 (-) | True | G97285 |
| TU107567 | lncRNA | downstream | 27188 | 86753745 ~ 86756765 (-) | False | G97283 |
| TU107600 | lncRNA | upstream | 14720 | 86799028 ~ 86804675 (-) | True | G97312 |
| TU107601 | lncRNA | upstream | 16135 | 86800443 ~ 86806508 (-) | True | G97313 |
| TU107604 | lncRNA | upstream | 22531 | 86806839 ~ 86807162 (-) | True | G97315 |
| TU107677 | lncRNA | upstream | 129248 | 86913556 ~ 87104621 (-) | True | G97377 |
| TU107679 | lncRNA | upstream | 129516 | 86913824 ~ 86914345 (-) | True | G97379 |
| XR_005053241.1 | mRNA | downstream | 51416 | 86730931 ~ 86732537 (-) | False | LOC118966041 |
| XR_005053236.1 | mRNA | downstream | 85728 | 86671506 ~ 86698225 (-) | False | LOC118936335 |
| XM_036987915.1 | mRNA | downstream | 85728 | 86671590 ~ 86698225 (-) | False | LOC118936335 |
| XR_005053237.1 | mRNA | downstream | 85728 | 86671647 ~ 86698225 (-) | True | LOC118936335 |
| XR_005053240.1 | mRNA | downstream | 85729 | 86671506 ~ 86698224 (-) | False | LOC118936335 |
| XM_036987970.1 | mRNA | upstream | 142131 | 86926439 ~ 86954561 (-) | True | LOC118966043 |
| XM_036990006.1 | mRNA | upstream | 173590 | 86957898 ~ 87049090 (-) | True | LOC110532959 |
| XM_036990012.1 | mRNA | upstream | 377969 | 87162277 ~ 87166534 (-) | True | LOC118966727 |
| XM_036990021.1 | mRNA | upstream | 383577 | 87167885 ~ 87204885 (-) | True | LOC118966728 |
| XM_036990028.1 | mRNA | upstream | 423156 | 87207464 ~ 87230079 (-) | True | LOC118966729 |
| TU107498 | other | downstream | 160642 | 86566477 ~ 86623311 (-) | True | G97251 |
| TU107372 | other | downstream | 390864 | 86392561 ~ 86393089 (-) | True | G97176 |
| TU107204 | other | downstream | 632614 | 86146009 ~ 86151339 (-) | False | G97047 |
| TU105927 | other | downstream | 1432187 | 85346858 ~ 85351766 (-) | False | G96002 |
| TU107596 | other | upstream | 2749 | 86787057 ~ 86788052 (-) | True | G97308 |
| TU107871 | other | upstream | 510049 | 87294357 ~ 87294999 (-) | True | G97535 |
| TU108928 | other | upstream | 1128994 | 87913302 ~ 87915900 (-) | False | LOC110531505 |
| TU109033 | other | upstream | 1279154 | 88063462 ~ 88064854 (-) | False | pex13 |
| TU109035 | other | upstream | 1279154 | 88063462 ~ 88064914 (-) | True | pex13 |
