RNA id: XM_036990098.1



Basic Information


Item Value
RNA id XM_036990098.1
length 1014
RNA type mRNA
GC content 0.47
exon number 3
gene id LOC118966742
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 92847464 ~ 92848944 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GGTATCTACACTACGTTGGGGGAGATGTTGGTATCTACACTACGTTGGGGGAGATGTTGGTATCTAAACTACGTTGGGGGAGATGTTGGTATCTACACTACATTGGAGGAGATGTTGGTATCTACACTACGTTGGGGGAGATGTTGGTATCTACACTACGTAGGGGGAGATGTTGGTATCTACACTACATTGGGGGGAGATGTTGGTATCTACACTACGTTGGGGGAGATGTTGGTATCTACACTACGTCGGGGGAGATGTTGGTATCTACACTACGTTGGGGGAGATGTTGGTATCTACACTACGTCGGGGGAGATGTTGGTATCTACACTACGTTGGGGGAGATGTTGGTATCTACACTACGTTGGGGGAGTTGTTGGTATCTACACTACGTTGGGTATCTACACTACATTGGGGGAGATATTGGTTTCTACACTACGTTGGGGGAGATGTTGGTATCTACACTTCGTTGGGGATCTACACTATTTTGGGGGAGATGTTGGTATCTACACTACGTTGGGTATCTACACTATTTTGGGGGAGATGTTGGTATCTACACTACGTTGGGGGAGATGTTGGTATCTACACTACGTTGGGGGAGATGTTGGTATCTACACTACGTTGGGGGAGATGTTGGTATATACACTACGTTGGGTATCTACACTATGTTGGGGGAGATGCTGGCATCTACACTACGTTGGGTATCTACACTATGTTGGGGGAGATGTTGGTATCTACACTATGTTGGGGGAGATGTTGGTATCTACACTTCGTTGGGGGAGATGTTGGTATCTACACTACATTGGGTATCTACACTATTTTGGGGGAGATGTTGGTATCTACACTACGTTGGGGGAGATGTTGGTATCTACACTACGTTGGGGGAGATGTTGGTATCTACACTACGTTGGGGGAGATGTTGGTATCTACACTACGTTGGGGGAGATGTTGGTATCTACACTACGTTGGAGGAGATGTTGGTATCTACACTACATTGGGGGGAGAGGtcaatga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU114001 lncRNA downstream 27591 92819300 ~ 92819873 (-) True G102143
TU113995 lncRNA downstream 47177 92800083 ~ 92800287 (-) True G102138
TU113989 lncRNA downstream 58100 92789041 ~ 92789364 (-) True G102133
TU113988 lncRNA downstream 58618 92788595 ~ 92788846 (-) True G102132
TU113982 lncRNA downstream 78549 92768122 ~ 92768915 (-) True G102126
TU114036 lncRNA upstream 35816 92884760 ~ 92885362 (-) True G102161
TU114042 lncRNA upstream 66368 92915312 ~ 92915910 (-) True G102167
TU114047 lncRNA upstream 82249 92931193 ~ 92931461 (-) True G102172
TU114052 lncRNA upstream 91778 92940722 ~ 92941254 (-) False G102174
TU114053 lncRNA upstream 91778 92940722 ~ 92941254 (-) True G102174
XM_036990094.1 mRNA downstream 225462 92617056 ~ 92622002 (-) True LOC118966741
XM_036990088.1 mRNA downstream 302577 92543889 ~ 92544887 (-) True LOC118966740
XM_036988702.1 mRNA downstream 1015085 91793618 ~ 91832379 (-) False LOC110531398
XM_036988692.1 mRNA downstream 1317017 91317168 ~ 91530447 (-) False LOC118966091
XM_036988681.1 mRNA downstream 1317018 91317168 ~ 91530446 (-) False LOC118966091
XM_036988731.1 mRNA upstream 96 92849040 ~ 92850414 (-) False LOC118966095
XM_036988734.1 mRNA upstream 208 92849152 ~ 92850414 (-) False LOC118966095
XM_036988727.1 mRNA upstream 225 92849169 ~ 92850460 (-) True LOC118966095
XM_036988780.1 mRNA upstream 19658 92868602 ~ 92906174 (-) False LOC110528622
XM_036988786.1 mRNA upstream 19658 92868602 ~ 92906179 (-) False LOC110528622
TU113974 other downstream 107934 92739013 ~ 92739530 (-) True G102119
TU113918 other downstream 208583 92637298 ~ 92638881 (-) True G102083
TU113894 other downstream 251950 92591581 ~ 92595514 (-) True G102060
TU112492 other downstream 1050019 91792579 ~ 91797445 (-) True LOC110531398
TU111909 other downstream 1613676 91232740 ~ 91233788 (-) True G100582
TU114032 other upstream 24625 92873569 ~ 92874498 (-) True G102158
TU113838 other upstream 47537 92896481 ~ 93019288 (-) False LOC110528622
TU113839 other upstream 47537 92896481 ~ 92939885 (-) False LOC110528622
TU113840 other upstream 47537 92896481 ~ 92906045 (-) False LOC110528622
TU113841 other upstream 47537 92896481 ~ 93003971 (-) False LOC110528622

Expression Profile