Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1569 |
| length | 231 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G1258 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 698423 ~ 698653 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1564 | lncRNA | downstream | 9431 | 688765 ~ 688992 (-) | True | G1253 |
| TU1542 | lncRNA | downstream | 64856 | 631974 ~ 633567 (-) | False | plcxd1 |
| TU1519 | lncRNA | downstream | 87597 | 607905 ~ 610826 (-) | True | G1216 |
| TU1496 | lncRNA | downstream | 140849 | 557341 ~ 557574 (-) | True | G1194 |
| TU1463 | lncRNA | downstream | 197626 | 495190 ~ 500797 (-) | True | G1162 |
| TU1578 | lncRNA | upstream | 28830 | 727483 ~ 728304 (-) | True | G1265 |
| TU1612 | lncRNA | upstream | 102277 | 800930 ~ 808066 (-) | True | G1294 |
| TU1635 | lncRNA | upstream | 145717 | 844370 ~ 844736 (-) | True | G1314 |
| TU1641 | lncRNA | upstream | 158028 | 856681 ~ 857091 (-) | True | G1320 |
| TU1642 | lncRNA | upstream | 177277 | 875930 ~ 876883 (-) | True | G1321 |
| XM_036977465.1 | mRNA | downstream | 16506 | 633286 ~ 681917 (-) | False | plcxd1 |
| XM_036977490.1 | mRNA | downstream | 16506 | 633286 ~ 681917 (-) | False | plcxd1 |
| XM_036977352.1 | mRNA | downstream | 194169 | 502752 ~ 504254 (-) | True | LOC118964585 |
| XM_021583381.2 | mRNA | downstream | 392376 | 260364 ~ 306047 (-) | True | tmem45a |
| XM_021583490.2 | mRNA | downstream | 454804 | 237111 ~ 243619 (-) | False | sft2d2a |
| XM_036977605.1 | mRNA | upstream | 3873 | 702526 ~ 721187 (-) | False | LOC110520928 |
| XM_036977642.1 | mRNA | upstream | 3873 | 702526 ~ 721396 (-) | False | LOC110520928 |
| XM_036977554.1 | mRNA | upstream | 3873 | 702526 ~ 736791 (-) | True | LOC110520928 |
| XM_036977717.1 | mRNA | upstream | 50788 | 749441 ~ 771316 (-) | False | rp2 |
| XM_036977758.1 | mRNA | upstream | 50788 | 749441 ~ 771316 (-) | False | rp2 |
| TU1544 | other | downstream | 16527 | 649951 ~ 681896 (-) | True | plcxd1 |
| TU323 | other | downstream | 455000 | 237129 ~ 243423 (-) | True | sft2d2a |
| TU247 | other | downstream | 672750 | 25269 ~ 25673 (-) | True | G202 |
| TU1695 | other | upstream | 271532 | 970185 ~ 976099 (-) | False | G1355 |
| TU1693 | other | upstream | 271753 | 970406 ~ 974095 (-) | False | G1355 |
| TU1694 | other | upstream | 271753 | 970406 ~ 972696 (-) | False | G1355 |
| TU2151 | other | upstream | 1054592 | 1753245 ~ 1760430 (-) | True | G1651 |
| TU2331 | other | upstream | 1393757 | 2092410 ~ 2097124 (-) | True | G1788 |
