RNA id: TCONS_00026341


Basic Information

Item Value
RNA id TCONS_00026341
length 119
RNA type rRNA
GC content 0.48
exon number 1
gene id XLOC_013321
representative True

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 15875662 ~ 15875780 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTCAATGAGTcaatatcaccctgcagcccaagaccaattactcactgaaactaagcagggctgagcttggtcagtacctggacaagacaccacatgggaaaactaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000121357

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00027277 lncRNA downstream 283137 15570911 ~ 15592525 (-) False XLOC_013318
TCONS_00026330 lncRNA downstream 505207 15367500 ~ 15370455 (-) True XLOC_013313
TCONS_00026328 lncRNA downstream 554732 15318386 ~ 15320930 (-) True XLOC_013312
TCONS_00026327 lncRNA downstream 563751 15296036 ~ 15311911 (-) False XLOC_013312
TCONS_00027276 lncRNA downstream 683850 15188017 ~ 15191812 (-) True XLOC_013310
TCONS_00026344 lncRNA upstream 17964 15893744 ~ 15899848 (-) True XLOC_013322
TCONS_00027278 lncRNA upstream 63481 15939261 ~ 15970557 (-) False XLOC_013323
TCONS_00027279 lncRNA upstream 86260 15962040 ~ 15970573 (-) True XLOC_013323
TCONS_00027280 lncRNA upstream 115674 15991454 ~ 16018087 (-) True XLOC_013324
TCONS_00027281 lncRNA upstream 349010 16224790 ~ 16265890 (-) False XLOC_013327
TCONS_00026340 mRNA downstream 104108 15770461 ~ 15771554 (-) True XLOC_013320
TCONS_00026337 mRNA downstream 264806 15569627 ~ 15610856 (-) False XLOC_013318
TCONS_00026336 mRNA downstream 315845 15554381 ~ 15559817 (-) True XLOC_013317
TCONS_00026333 mRNA downstream 324206 15469015 ~ 15551456 (-) False XLOC_013316
TCONS_00026334 mRNA downstream 324302 15469857 ~ 15551360 (-) False XLOC_013316
TCONS_00026342 mRNA upstream 12050 15887830 ~ 15932704 (-) False XLOC_013322
TCONS_00026343 mRNA upstream 12059 15887839 ~ 15911394 (-) False XLOC_013322
TCONS_00026345 mRNA upstream 235405 16111185 ~ 16123222 (-) True XLOC_013325
TCONS_00026346 mRNA upstream 275994 16151774 ~ 16179129 (-) False XLOC_013326
TCONS_00026347 mRNA upstream 275994 16151774 ~ 16181952 (-) True XLOC_013326
TCONS_00026338 other downstream 265425 15578502 ~ 15610237 (-) True XLOC_013318
TCONS_00026339 other downstream 287461 15588087 ~ 15588201 (-) True XLOC_013319
TCONS_00026322 other downstream 839393 15036151 ~ 15036269 (-) True XLOC_013308
TCONS_00026312 other downstream 1004526 14866383 ~ 14871136 (-) True XLOC_013303
TCONS_00026302 other downstream 1538204 14336627 ~ 14337458 (-) True XLOC_013296
TCONS_00026386 other upstream 1536090 17411870 ~ 17415589 (-) False XLOC_013343
TCONS_00026401 other upstream 2693461 18569241 ~ 18569322 (-) True XLOC_013355
TCONS_00026402 other upstream 2701694 18577474 ~ 18577549 (-) True XLOC_013356
TCONS_00026403 other upstream 2702034 18577814 ~ 18577894 (-) True XLOC_013357
TCONS_00026408 other upstream 2820427 18696207 ~ 18701764 (-) True XLOC_013360