Item | Value |
---|---|
RNA id | TU1022 |
length | 677 |
lncRNA type | inter_gene |
GC content | 0.38 |
exon number | 2 |
gene id | G805 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048565.1 |
NCBI id | CM023219.2 |
chromosome length | 95772356 |
location | 1711284 ~ 1724056 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU1007 | lncRNA | upstream | 2555 | 1661290 ~ 1708729 (+) | False | G792 |
TU993 | lncRNA | upstream | 2555 | 1695529 ~ 1708729 (+) | False | G792 |
TU1025 | lncRNA | upstream | 7546 | 1692275 ~ 1703738 (+) | True | G808 |
TU1024 | lncRNA | upstream | 10705 | 1690715 ~ 1700579 (+) | True | G807 |
TU1015 | lncRNA | upstream | 13719 | 1693916 ~ 1697565 (+) | True | G798 |
TU1042 | lncRNA | downstream | 15225 | 1739281 ~ 1751211 (+) | True | G824 |
TU1056 | lncRNA | downstream | 43782 | 1767838 ~ 1768365 (+) | True | G836 |
TU1071 | lncRNA | downstream | 86612 | 1810668 ~ 1811153 (+) | True | G848 |
TU1134 | lncRNA | downstream | 172710 | 1896766 ~ 1897519 (+) | True | G901 |
TU1162 | lncRNA | downstream | 254051 | 1978107 ~ 1978417 (+) | True | G927 |
XM_036978985.1 | mRNA | upstream | 114665 | 1460067 ~ 1596619 (+) | False | atp10a |
XM_036978913.1 | mRNA | upstream | 114665 | 1461493 ~ 1596619 (+) | True | atp10a |
XM_021608164.2 | mRNA | upstream | 312904 | 1334097 ~ 1398380 (+) | True | gabrb3 |
XR_005051889.1 | mRNA | upstream | 383018 | 1327322 ~ 1328266 (+) | True | LOC118964682 |
XM_036978261.1 | mRNA | upstream | 410660 | 1193232 ~ 1300624 (+) | True | cyfip1 |
XM_036979059.1 | mRNA | downstream | 8733 | 1732789 ~ 1770434 (+) | False | LOC110520782 |
XM_036979130.1 | mRNA | downstream | 8738 | 1732794 ~ 1770434 (+) | False | LOC110520782 |
XM_036979098.1 | mRNA | downstream | 8749 | 1732805 ~ 1770434 (+) | False | LOC110520782 |
XM_036979162.1 | mRNA | downstream | 8749 | 1732805 ~ 1770434 (+) | False | LOC110520782 |
XM_036979236.1 | mRNA | downstream | 12689 | 1736745 ~ 1770434 (+) | True | LOC110520782 |
TU710 | other | upstream | 701077 | 1003783 ~ 1010207 (+) | False | G583 |
TU707 | other | upstream | 702131 | 1003783 ~ 1009153 (+) | False | G583 |
TU206 | other | upstream | 1391310 | 318047 ~ 319974 (+) | False | G166 |
TU83 | other | upstream | 1581021 | 120466 ~ 130263 (+) | True | G51 |
TU80 | other | upstream | 1590977 | 112959 ~ 120307 (+) | True | G50 |
TU1201 | other | downstream | 354842 | 2078898 ~ 2079603 (+) | False | G961 |
TU1202 | other | downstream | 354842 | 2078898 ~ 2079603 (+) | False | G961 |
TU1203 | other | downstream | 354842 | 2078898 ~ 2079603 (+) | True | G961 |
TU1265 | other | downstream | 534827 | 2258883 ~ 2263565 (+) | False | G998 |
TU1266 | other | downstream | 534827 | 2258883 ~ 2263565 (+) | False | G998 |