RNA id: TCONS_00026385


Basic Information

Item Value
RNA id TCONS_00026385
length 1779
RNA type mRNA
GC content 0.45
exon number 13
gene id XLOC_013343
representative False

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 17408470 ~ 17415609 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TTTAAGGCTTGAGTCTCTGTGAGTCTTTCGTGGAAAAGCAGCCATGATAAAAGACGTTTTGCTTTGCTTGTGTTTGACACTGGCACCTGTCTGGAGCGCCCCTGTACAGGAAGATTCTGGGCCAGTGGCTGTTTTGAAGCATGGCAGTGTCCGTGGGCAATATGTGAAAGCTAAAGGATCTCCAGCTGTTGTGGAGCAATATTTGGGCATTCCTTTTGCCCAGCCGCCTGTTGGCCCTCACCGTCTAGCAGCTCCACAGCCTGTACAGGGATGGGAGGGCATAAGAAATGCCACCGAACACCCTTTAATGTGCCTTCAAAACCCAGATATTTTACCTGCGATTGCAAAAGCTATTGATTTGGAAGTTACAGCTATAGGGGTCTCAGAGGACTGTTTGTATCTGAATGTTTACACTCCATCTCAAAGAGCAGAATCAGAGAAACTTCCAGTAATGATTTGGATTCATGGAGGGGGTCTGGCCATGGGTGGAGCTTGCATGTTTAAGGAATTGTGCTTGTATGACGGAACCCCTCTGGCAGCCTATGAAAAAGTAGTTGTGGTTGTCATTCAGTATCGACTTGGAATATTAGGATACTTCAGCACAGGAGATCAGCATGCAAAAGGAAACTGGGGTTTCCTCGACCAGATCGCAGCTTTACAGTGGGTGCAGCAAAACATTGAGGCTTTTGGAGGAGACCCTCAGTCTGTCACCATAGCTGGAGAGTCTGCAGGAGGAATCAGTGCCTCTTTGTTGACATTGTCACCCATGACCAAGGGTCTGTTTCAGCGGGCCATTTTTCAGAGTGGGGTAGCAACTGTGAAGGGATACTTTGTCAAAGACCCTTCAACACATGCCCAGGTAATTGCAAATATTACAGAGTGTGACTTTAGCTCTTCTGAAGTGTTGGTCAAATGCATCAGAGAAATGACTGAGGAACAGATCATCAAAGCTGCTCAAAAGAAAGGCATTTTCCCTGGAGCAGCAGTTGATGGGGAATTTATTAAAGCTCAGCCGGAGGAGATCCTGAAGAGTAAAGACTTTCAGAAAGTTCCAATACTTATTGGAACAACAAACCATGAATTTGGGTGGATGCTCCCCCAGATTTTCCTCCCAAAAGAATGGGTGAAAGGGATGGACACAAAAGCAGCAAAAGACCGTTTGGGTCTTTTAAACGCAGATGGAGCTTCAGGAGCCAATGGAATCATAGCGGACGAAtactttaaaaatgctaaaactccAGAGGAGATTCGAGACGCATTTACTGAGCTGCTCGGGGATATATTCATGGTGATACCCTCCATCACAGTTGCCTCTTATCACAGAGAAGCCGGAGTGCCTGTGTATATGTATGAGTTCCAGCACGGGCCAAGTACAGCTAATAAATTCAGACCCAGTTTTGTGAAGGCCGACCATGCTGATGATGTTGGATTTGTGTTTGGGGCCTGCTTTTGGGATGTTCATGTCAAAGGTTTAGGAACACTCACTGAAGAAGAAAACCAATTATGCAGAACTGTCATGAAATACTGGGCTAACTTTATTCGTACTGGATCACCAAATCCCGCTCCAGTGCCCTGGCCTGTTTATGACCAGTCTAATAAGTACTTGAACCTGGGTTTGCAGCAAACTGAGGGACAGGACCTTAAGAAGGACAAGCTGCTCTTTTTCACTGAAGAATTACCTAAAAAACTAGCTGCACCTCCCACAGCCTGAACAGTTGTTGCACCAATAAACTTGGTACttctgttattaaaaataaatctaattcaGACATCTGTGTG

Function

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005615 extracellular space cellular_component
GO:0004771 sterol esterase activity molecular_function
GO:0004806 triglyceride lipase activity molecular_function
GO:0052689 carboxylic ester hydrolase activity molecular_function
GO:0016787 hydrolase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-061013-99 Predicted to enable carboxylic ester hydrolase activity; mannosyl-oligosaccharide mannosidase activity; and phospholipase activity. Is expressed in liver; pectoral fin; pleuroperitoneal region; yolk; and yolk syncytial layer. Orthologous to human CES2 (carboxylesterase 2).

Ensembl:

ensembl_id ENSDART00000100190

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00026958 lncRNA downstream 1031129 16372210 ~ 16377341 (-) True XLOC_013329
TCONS_00026348 lncRNA downstream 1100533 16258787 ~ 16307937 (-) False XLOC_013327
TCONS_00027284 lncRNA downstream 1100537 16296881 ~ 16307933 (-) True XLOC_013327
TCONS_00027282 lncRNA downstream 1142580 16251074 ~ 16265890 (-) False XLOC_013327
TCONS_00026959 lncRNA upstream 75712 17491321 ~ 17492706 (-) True XLOC_013345
TCONS_00026394 lncRNA upstream 292349 17707958 ~ 17712667 (-) True XLOC_013348
TCONS_00027285 lncRNA upstream 361918 17777527 ~ 17786790 (-) True XLOC_013349
TCONS_00027286 lncRNA upstream 696385 18111994 ~ 18113888 (-) True XLOC_013351
TCONS_00026400 lncRNA upstream 1135599 18551208 ~ 18555561 (-) True XLOC_013354
TCONS_00026384 mRNA downstream 9094 17271440 ~ 17399376 (-) True XLOC_013342
TCONS_00026383 mRNA downstream 9168 17271186 ~ 17399302 (-) False XLOC_013342
TCONS_00026382 mRNA downstream 9179 17270427 ~ 17399291 (-) False XLOC_013342
TCONS_00026378 mRNA downstream 260667 17076680 ~ 17147803 (-) False XLOC_013341
TCONS_00026377 mRNA downstream 260667 17076680 ~ 17147803 (-) False XLOC_013341
TCONS_00026388 mRNA upstream 67948 17483557 ~ 17485419 (-) True XLOC_013344
TCONS_00026389 mRNA upstream 96386 17511995 ~ 17513426 (-) True XLOC_013346
TCONS_00026390 mRNA upstream 100960 17516569 ~ 17531483 (-) False XLOC_013347
TCONS_00026391 mRNA upstream 100961 17516570 ~ 17529763 (-) True XLOC_013347
TCONS_00026392 mRNA upstream 292079 17707688 ~ 17721810 (-) False XLOC_013348
TCONS_00026341 other downstream 1532690 15875662 ~ 15875780 (-) True XLOC_013321
TCONS_00026338 other downstream 1798233 15578502 ~ 15610237 (-) True XLOC_013318
TCONS_00026339 other downstream 1820269 15588087 ~ 15588201 (-) True XLOC_013319
TCONS_00026322 other downstream 2372201 15036151 ~ 15036269 (-) True XLOC_013308
TCONS_00026312 other downstream 2537334 14866383 ~ 14871136 (-) True XLOC_013303
TCONS_00026401 other upstream 1153632 18569241 ~ 18569322 (-) True XLOC_013355
TCONS_00026402 other upstream 1161865 18577474 ~ 18577549 (-) True XLOC_013356
TCONS_00026403 other upstream 1162205 18577814 ~ 18577894 (-) True XLOC_013357
TCONS_00026408 other upstream 1280598 18696207 ~ 18701764 (-) True XLOC_013360
TCONS_00026410 other upstream 1328853 18744462 ~ 18749405 (-) True XLOC_013362

Expression Profile

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