RNA id: TCONS_00026395


Basic Information

Item Value
RNA id TCONS_00026395
length 126
RNA type mRNA
GC content 0.35
exon number 6
gene id XLOC_013350
representative True

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 18087260 ~ 18122969 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AGCTTTGACAACAAAAATGAGATGTTCTTTAAAccgcgcataaatattTATTACTTCAATTATCATaaggttAATGGatttaaccgccaacttatccagcaaactgttttacacagcagatggccc

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000189113

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00027285 lncRNA downstream 300470 17777527 ~ 17786790 (-) True XLOC_013349
TCONS_00026394 lncRNA downstream 374593 17707958 ~ 17712667 (-) True XLOC_013348
TCONS_00026959 lncRNA downstream 594554 17491321 ~ 17492706 (-) True XLOC_013345
TCONS_00026958 lncRNA downstream 1709919 16372210 ~ 16377341 (-) True XLOC_013329
TCONS_00026348 lncRNA downstream 1779323 16258787 ~ 16307937 (-) False XLOC_013327
TCONS_00026400 lncRNA upstream 428239 18551208 ~ 18555561 (-) True XLOC_013354
TCONS_00027287 lncRNA upstream 506097 18629066 ~ 18634673 (-) True XLOC_013358
TCONS_00027288 lncRNA upstream 591004 18713973 ~ 18727032 (-) False XLOC_013361
TCONS_00026409 lncRNA upstream 591004 18713973 ~ 18727032 (-) True XLOC_013361
TCONS_00027289 lncRNA upstream 621493 18744462 ~ 18749405 (-) False XLOC_013362
TCONS_00026393 mRNA downstream 362965 17707688 ~ 17724295 (-) False XLOC_013348
TCONS_00026392 mRNA downstream 365450 17707688 ~ 17721810 (-) False XLOC_013348
TCONS_00026390 mRNA downstream 555777 17516569 ~ 17531483 (-) False XLOC_013347
TCONS_00026391 mRNA downstream 557497 17516570 ~ 17529763 (-) True XLOC_013347
TCONS_00026389 mRNA downstream 573834 17511995 ~ 17513426 (-) True XLOC_013346
TCONS_00026396 mRNA upstream 352705 18475674 ~ 18524624 (-) True XLOC_013352
TCONS_00026397 mRNA upstream 404201 18527170 ~ 18543358 (-) True XLOC_013353
TCONS_00026398 mRNA upstream 424054 18547023 ~ 18587745 (-) False XLOC_013354
TCONS_00026399 mRNA upstream 427449 18550418 ~ 18584839 (-) False XLOC_013354
TCONS_00026405 mRNA upstream 513304 18636273 ~ 18667416 (-) False XLOC_013359
TCONS_00026386 other downstream 671671 17411870 ~ 17415589 (-) False XLOC_013343
TCONS_00026341 other downstream 2211480 15875662 ~ 15875780 (-) True XLOC_013321
TCONS_00026338 other downstream 2477023 15578502 ~ 15610237 (-) True XLOC_013318
TCONS_00026339 other downstream 2499059 15588087 ~ 15588201 (-) True XLOC_013319
TCONS_00026322 other downstream 3050991 15036151 ~ 15036269 (-) True XLOC_013308
TCONS_00026401 other upstream 446272 18569241 ~ 18569322 (-) True XLOC_013355
TCONS_00026402 other upstream 454505 18577474 ~ 18577549 (-) True XLOC_013356
TCONS_00026403 other upstream 454845 18577814 ~ 18577894 (-) True XLOC_013357
TCONS_00026408 other upstream 573238 18696207 ~ 18701764 (-) True XLOC_013360
TCONS_00026410 other upstream 621493 18744462 ~ 18749405 (-) True XLOC_013362