RNA id: TCONS_00026401


Basic Information

Item Value
RNA id TCONS_00026401
length 82
RNA type snoRNA
GC content 0.37
exon number 1
gene id XLOC_013355
representative True

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 18569241 ~ 18569322 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTGCCAGAAATGATGAATATCTTCATGTCTCTTCTCTGATTGTTTAGTGAAGAGAGATTTGTGATATCTGATCTTCATGCAC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000189598

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00026400 lncRNA downstream 13680 18551208 ~ 18555561 (-) True XLOC_013354
TCONS_00027286 lncRNA downstream 455353 18111994 ~ 18113888 (-) True XLOC_013351
TCONS_00027285 lncRNA downstream 782451 17777527 ~ 17786790 (-) True XLOC_013349
TCONS_00026394 lncRNA downstream 856574 17707958 ~ 17712667 (-) True XLOC_013348
TCONS_00026959 lncRNA downstream 1076535 17491321 ~ 17492706 (-) True XLOC_013345
TCONS_00027287 lncRNA upstream 59744 18629066 ~ 18634673 (-) True XLOC_013358
TCONS_00027288 lncRNA upstream 144651 18713973 ~ 18727032 (-) False XLOC_013361
TCONS_00026409 lncRNA upstream 144651 18713973 ~ 18727032 (-) True XLOC_013361
TCONS_00027289 lncRNA upstream 175140 18744462 ~ 18749405 (-) False XLOC_013362
TCONS_00027290 lncRNA upstream 218062 18787384 ~ 18793265 (-) False XLOC_013363
TCONS_00026397 mRNA downstream 25883 18527170 ~ 18543358 (-) True XLOC_013353
TCONS_00026396 mRNA downstream 44617 18475674 ~ 18524624 (-) True XLOC_013352
TCONS_00026395 mRNA downstream 446272 18087260 ~ 18122969 (-) True XLOC_013350
TCONS_00026393 mRNA downstream 844946 17707688 ~ 17724295 (-) False XLOC_013348
TCONS_00026392 mRNA downstream 847431 17707688 ~ 17721810 (-) False XLOC_013348
TCONS_00026405 mRNA upstream 66951 18636273 ~ 18667416 (-) False XLOC_013359
TCONS_00026404 mRNA upstream 66951 18636273 ~ 18667416 (-) False XLOC_013359
TCONS_00026406 mRNA upstream 67579 18636901 ~ 18821929 (-) False XLOC_013359
TCONS_00026407 mRNA upstream 87658 18656980 ~ 18662577 (-) False XLOC_013359
TCONS_00026413 mRNA upstream 234217 18803539 ~ 18850302 (-) False XLOC_013364
TCONS_00026386 other downstream 1153652 17411870 ~ 17415589 (-) False XLOC_013343
TCONS_00026341 other downstream 2693461 15875662 ~ 15875780 (-) True XLOC_013321
TCONS_00026338 other downstream 2959004 15578502 ~ 15610237 (-) True XLOC_013318
TCONS_00026339 other downstream 2981040 15588087 ~ 15588201 (-) True XLOC_013319
TCONS_00026322 other downstream 3532972 15036151 ~ 15036269 (-) True XLOC_013308
TCONS_00026402 other upstream 8152 18577474 ~ 18577549 (-) True XLOC_013356
TCONS_00026403 other upstream 8492 18577814 ~ 18577894 (-) True XLOC_013357
TCONS_00026408 other upstream 126885 18696207 ~ 18701764 (-) True XLOC_013360
TCONS_00026410 other upstream 175140 18744462 ~ 18749405 (-) True XLOC_013362
TCONS_00026411 other upstream 218062 18787384 ~ 18793265 (-) True XLOC_013363