RNA id: TCONS_00026429


Basic Information

Item Value
RNA id TCONS_00026429
length 825
RNA type processed_transcript
GC content 0.37
exon number 6
gene id XLOC_013371
representative False

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 19110047 ~ 19111916 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CTGGAGTTAAATTTTTAGAAAGTCCGCCATTACACAACTCTGCCGAGCAGCACATGAGAACTGGAGTTATGTTCTTCGTTGTGAGAAGTGGTAGGCCTACTTGATCAGATGGAGAAACCTGCTGTTCACATTTCAAATAGGCTAACTTACACAAAGAGgccACGATGCTGATAAAAGTGCAATTTGGAggcaagaaaaaatatattaaactggaAGAAGATTGTTTCTTGGATTTTTTCAGTGCGGTCCAGCACAAGTTTGTGATACCAGAGGAGACAGCATCAAAAGTCACAGATGACCATGGAGTTGTTATTTAAATGGGGATGTATTTCAAGAACTTGCAACAACCAAAGAAACATGTCATCCACACTAATGATGATTTGACTGTCCTGCAGCAAGGAGCTGTTGAAGTGCCCTCCTCCCCAAGTCTGACAGATTCATTGTCTGTGTCAAGCAGTTTGAGCAGCAGTGATTCTGGATCTCAAATTATTCAACCTTTAATGGGCAGTGtccaaaaaaatAAAATCGAGCAAATTCTAACTTCAAAGACAGCAGAGTTGACTGTGATTAAGGAGtatgacaagatatttttttgctgcttttgaTTCCTgtgaagttaattttatataatgtaatgtgttaAATTGTCTCATGCAATTTTACTAAGCCATTGGTTTTAGTTGGCACTAGCTGCTAACATAtattaattgtaaatgttttgctGTTAGATTTAATGCTGTGATGACAATTAATTTCAAAGTGTGTACATCGATGGAAATTCTAAATCTAATGTGTGGATTTGCATGAATAAAAGCAGTAAGTAAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000146392

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00026960 lncRNA downstream 231323 18876390 ~ 18878724 (-) True XLOC_013366
TCONS_00027291 lncRNA downstream 288677 18815654 ~ 18821370 (-) False XLOC_013359
TCONS_00027290 lncRNA downstream 316782 18787384 ~ 18793265 (-) False XLOC_013363
TCONS_00027289 lncRNA downstream 360642 18744462 ~ 18749405 (-) False XLOC_013362
TCONS_00026409 lncRNA downstream 383015 18713973 ~ 18727032 (-) True XLOC_013361
TCONS_00026439 lncRNA upstream 340863 19452614 ~ 19453739 (-) False XLOC_013375
TCONS_00026441 lncRNA upstream 342403 19454154 ~ 19456200 (-) False XLOC_013375
TCONS_00027293 lncRNA upstream 771840 19883591 ~ 19884294 (-) True XLOC_013386
TCONS_00027294 lncRNA upstream 1028321 20140072 ~ 20149097 (-) True XLOC_013387
TCONS_00027295 lncRNA upstream 1173914 20285665 ~ 20319873 (-) False XLOC_013388
TCONS_00026428 mRNA downstream 6118 19045126 ~ 19103929 (-) False XLOC_013370
TCONS_00026427 mRNA downstream 6118 19045126 ~ 19103929 (-) True XLOC_013370
TCONS_00026426 mRNA downstream 14877 19044873 ~ 19095170 (-) False XLOC_013370
TCONS_00026425 mRNA downstream 14906 19044839 ~ 19095141 (-) False XLOC_013370
TCONS_00026424 mRNA downstream 103413 18995594 ~ 19006634 (-) True XLOC_013369
TCONS_00026430 mRNA upstream 31686 19143437 ~ 19350792 (-) False XLOC_013372
TCONS_00026432 mRNA upstream 31686 19143437 ~ 19405616 (-) False XLOC_013372
TCONS_00026431 mRNA upstream 31686 19143437 ~ 19405616 (-) True XLOC_013372
TCONS_00026435 mRNA upstream 339319 19451070 ~ 19456269 (-) False XLOC_013375
TCONS_00026446 mRNA upstream 351674 19463425 ~ 19484919 (-) False XLOC_013382
TCONS_00026421 other downstream 110792 18995247 ~ 18999255 (-) False XLOC_013369
TCONS_00026414 other downstream 288677 18815654 ~ 18821370 (-) True XLOC_013359
TCONS_00026411 other downstream 316782 18787384 ~ 18793265 (-) True XLOC_013363
TCONS_00026410 other downstream 360642 18744462 ~ 18749405 (-) True XLOC_013362
TCONS_00026408 other downstream 408283 18696207 ~ 18701764 (-) True XLOC_013360
TCONS_00026433 other upstream 263088 19374839 ~ 19374955 (-) True XLOC_013373
TCONS_00026434 other upstream 311260 19423011 ~ 19423128 (-) True XLOC_013374
TCONS_00026436 other upstream 339831 19451582 ~ 19451651 (-) True XLOC_013376
TCONS_00026437 other upstream 340119 19451870 ~ 19451937 (-) True XLOC_013377
TCONS_00026438 other upstream 340459 19452210 ~ 19452278 (-) True XLOC_013378

Expression Profile

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