RNA id: TCONS_00026434


Basic Information

Item Value
RNA id TCONS_00026434
length 118
RNA type rRNA
GC content 0.53
exon number 1
gene id XLOC_013374
representative True

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 19423011 ~ 19423128 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ggccACAGCCATAAAGCCCTGCAGCCGAAGACCAGTTTCtaactaaagctaagcagggctgggcctggttagtacctggatgggaaatcACAgggggaaaactaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000117868

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00027292 lncRNA downstream 311095 19110047 ~ 19111916 (-) True XLOC_013371
TCONS_00026960 lncRNA downstream 544287 18876390 ~ 18878724 (-) True XLOC_013366
TCONS_00027291 lncRNA downstream 601641 18815654 ~ 18821370 (-) False XLOC_013359
TCONS_00027290 lncRNA downstream 629746 18787384 ~ 18793265 (-) False XLOC_013363
TCONS_00027289 lncRNA downstream 673606 18744462 ~ 18749405 (-) False XLOC_013362
TCONS_00026439 lncRNA upstream 29486 19452614 ~ 19453739 (-) False XLOC_013375
TCONS_00026441 lncRNA upstream 31026 19454154 ~ 19456200 (-) False XLOC_013375
TCONS_00027293 lncRNA upstream 460463 19883591 ~ 19884294 (-) True XLOC_013386
TCONS_00027294 lncRNA upstream 716944 20140072 ~ 20149097 (-) True XLOC_013387
TCONS_00027295 lncRNA upstream 862537 20285665 ~ 20319873 (-) False XLOC_013388
TCONS_00026432 mRNA downstream 17395 19143437 ~ 19405616 (-) False XLOC_013372
TCONS_00026431 mRNA downstream 17395 19143437 ~ 19405616 (-) True XLOC_013372
TCONS_00026430 mRNA downstream 72219 19143437 ~ 19350792 (-) False XLOC_013372
TCONS_00026428 mRNA downstream 319082 19045126 ~ 19103929 (-) False XLOC_013370
TCONS_00026427 mRNA downstream 319082 19045126 ~ 19103929 (-) True XLOC_013370
TCONS_00026435 mRNA upstream 27942 19451070 ~ 19456269 (-) False XLOC_013375
TCONS_00026446 mRNA upstream 40297 19463425 ~ 19484919 (-) False XLOC_013382
TCONS_00026445 mRNA upstream 40297 19463425 ~ 19484919 (-) True XLOC_013382
TCONS_00026447 mRNA upstream 64574 19487702 ~ 19491162 (-) True XLOC_013383
TCONS_00026449 mRNA upstream 389480 19812608 ~ 19819812 (-) True XLOC_013385
TCONS_00026433 other downstream 48056 19374839 ~ 19374955 (-) True XLOC_013373
TCONS_00026429 other downstream 311260 19110047 ~ 19111751 (-) False XLOC_013371
TCONS_00026421 other downstream 423756 18995247 ~ 18999255 (-) False XLOC_013369
TCONS_00026414 other downstream 601641 18815654 ~ 18821370 (-) True XLOC_013359
TCONS_00026411 other downstream 629746 18787384 ~ 18793265 (-) True XLOC_013363
TCONS_00026436 other upstream 28454 19451582 ~ 19451651 (-) True XLOC_013376
TCONS_00026437 other upstream 28742 19451870 ~ 19451937 (-) True XLOC_013377
TCONS_00026438 other upstream 29082 19452210 ~ 19452278 (-) True XLOC_013378
TCONS_00026440 other upstream 29623 19452751 ~ 19452881 (-) True XLOC_013379
TCONS_00026442 other upstream 31358 19454486 ~ 19454583 (-) True XLOC_013375