Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00026452 |
| length | 1198 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 3 |
| gene id | XLOC_013389 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007129.7 |
| NCBI id | CM002902.2 |
| chromosome length | 51023478 |
| location | 20435821 ~ 20458840 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0072383 | plus-end-directed vesicle transport along microtubule | biological_process |
| GO:0036089 | cleavage furrow formation | biological_process |
| GO:0000915 | actomyosin contractile ring assembly | biological_process |
| GO:0007018 | microtubule-based movement | biological_process |
| GO:0051256 | mitotic spindle midzone assembly | biological_process |
| GO:0047496 | vesicle transport along microtubule | biological_process |
| GO:0040016 | embryonic cleavage | biological_process |
| GO:0000281 | mitotic cytokinesis | biological_process |
| GO:0005871 | kinesin complex | cellular_component |
| GO:0005874 | microtubule | cellular_component |
| GO:0032154 | cleavage furrow | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0003777 | microtubule motor activity | molecular_function |
| GO:0008017 | microtubule binding | molecular_function |
| GO:0016887 | ATPase activity | molecular_function |
| id | description |
|---|---|
| ko05206 | MicroRNAs in cancer |
| ko04131 | Membrane trafficking |
| ko03036 | Chromosome and associated proteins |
| ko04812 | Cytoskeleton proteins |
| id | description |
|---|---|
| ZDB-GENE-991019-4 | Predicted to enable ATP hydrolysis activity; microtubule binding activity; and microtubule motor activity. Acts upstream of or within cytoskeleton-dependent cytokinesis; embryonic cleavage; and vesicle transport along microtubule. Located in several cellular components, including cleavage furrow; microtubule; and nucleus. Is expressed in proliferative region. Orthologous to human KIF23 (kinesin family member 23). |
| ensembl_id | ENSDART00000132993 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00027295 | lncRNA | downstream | 121505 | 20285665 ~ 20319873 (-) | False | XLOC_013388 |
| TCONS_00026961 | lncRNA | downstream | 121583 | 20305484 ~ 20319795 (-) | True | XLOC_013388 |
| TCONS_00027294 | lncRNA | downstream | 292281 | 20140072 ~ 20149097 (-) | True | XLOC_013387 |
| TCONS_00027293 | lncRNA | downstream | 557084 | 19883591 ~ 19884294 (-) | True | XLOC_013386 |
| TCONS_00026441 | lncRNA | downstream | 985178 | 19454154 ~ 19456200 (-) | False | XLOC_013375 |
| TCONS_00026461 | lncRNA | upstream | 153768 | 20598064 ~ 20608237 (-) | False | XLOC_013393 |
| TCONS_00026963 | lncRNA | upstream | 720530 | 21164826 ~ 21168118 (-) | False | XLOC_013403 |
| TCONS_00026962 | lncRNA | upstream | 720530 | 21164826 ~ 21168118 (-) | True | XLOC_013403 |
| TCONS_00026498 | lncRNA | upstream | 1487957 | 21932253 ~ 21936575 (-) | False | XLOC_013415 |
| TCONS_00026499 | lncRNA | upstream | 1499909 | 21944205 ~ 21947172 (-) | True | XLOC_013415 |
| TCONS_00026449 | mRNA | downstream | 621566 | 19812608 ~ 19819812 (-) | True | XLOC_013385 |
| TCONS_00026447 | mRNA | downstream | 950216 | 19487702 ~ 19491162 (-) | True | XLOC_013383 |
| TCONS_00026446 | mRNA | downstream | 956459 | 19463425 ~ 19484919 (-) | False | XLOC_013382 |
| TCONS_00026445 | mRNA | downstream | 956459 | 19463425 ~ 19484919 (-) | True | XLOC_013382 |
| TCONS_00026435 | mRNA | downstream | 985109 | 19451070 ~ 19456269 (-) | False | XLOC_013375 |
| TCONS_00026453 | mRNA | upstream | 15592 | 20459888 ~ 20466061 (-) | True | XLOC_013390 |
| TCONS_00026454 | mRNA | upstream | 72231 | 20516527 ~ 20532339 (-) | True | XLOC_013391 |
| TCONS_00026455 | mRNA | upstream | 97020 | 20541316 ~ 20560007 (-) | False | XLOC_013392 |
| TCONS_00026457 | mRNA | upstream | 98881 | 20543177 ~ 20560059 (-) | True | XLOC_013392 |
| TCONS_00026458 | mRNA | upstream | 137389 | 20581685 ~ 20608300 (-) | False | XLOC_013393 |
| TCONS_00026448 | other | downstream | 899147 | 19542102 ~ 19542231 (-) | True | XLOC_013384 |
| TCONS_00026444 | other | downstream | 986137 | 19455144 ~ 19455241 (-) | True | XLOC_013381 |
| TCONS_00026443 | other | downstream | 986511 | 19454800 ~ 19454867 (-) | True | XLOC_013380 |
| TCONS_00026442 | other | downstream | 986795 | 19454486 ~ 19454583 (-) | True | XLOC_013375 |
| TCONS_00026440 | other | downstream | 988497 | 19452751 ~ 19452881 (-) | True | XLOC_013379 |
| TCONS_00026456 | other | upstream | 97554 | 20541850 ~ 20559990 (-) | False | XLOC_013392 |
| TCONS_00026460 | other | upstream | 140794 | 20585090 ~ 20594242 (-) | False | XLOC_013393 |
| TCONS_00026464 | other | upstream | 189493 | 20633789 ~ 20633923 (-) | True | XLOC_013395 |
| TCONS_00026468 | other | upstream | 401894 | 20846190 ~ 20846313 (-) | True | XLOC_013398 |
| TCONS_00026472 | other | upstream | 576615 | 21020911 ~ 21024571 (-) | True | XLOC_013400 |
