Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU19036 |
| length | 219 |
| lncRNA type | intronic |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G16228 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 17377755 ~ 17378361 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU19024 | lncRNA | downstream | 15206 | 17362332 ~ 17362549 (-) | True | G16220 |
| TU19022 | lncRNA | downstream | 16982 | 17360516 ~ 17360773 (-) | True | G16218 |
| TU19012 | lncRNA | downstream | 20777 | 17354482 ~ 17356978 (-) | False | G16216 |
| TU19014 | lncRNA | downstream | 20777 | 17355408 ~ 17356978 (-) | True | G16216 |
| TU19011 | lncRNA | downstream | 20847 | 17354482 ~ 17356908 (-) | False | G16216 |
| TU19090 | lncRNA | upstream | 69549 | 17447910 ~ 17448363 (-) | True | G16271 |
| TU19091 | lncRNA | upstream | 70682 | 17449043 ~ 17449261 (-) | True | G16272 |
| TU19093 | lncRNA | upstream | 73387 | 17451748 ~ 17452224 (-) | True | G16274 |
| TU19094 | lncRNA | upstream | 74112 | 17452473 ~ 17452740 (-) | True | G16275 |
| TU19096 | lncRNA | upstream | 74782 | 17453143 ~ 17453557 (-) | True | G16277 |
| XR_005038000.1 | mRNA | downstream | 12263 | 17362899 ~ 17365492 (-) | True | LOC118942066 |
| XM_021569135.2 | mRNA | downstream | 34205 | 17329927 ~ 17343550 (-) | True | LOC110494221 |
| XM_021568957.2 | mRNA | downstream | 50996 | 17314484 ~ 17326759 (-) | False | comp |
| XR_002469236.2 | mRNA | downstream | 50996 | 17314484 ~ 17326759 (-) | True | comp |
| XM_021567512.2 | mRNA | downstream | 156798 | 17173402 ~ 17220957 (-) | True | LOC110493215 |
| LOC110531963 | mRNA | upstream | 12535 | 17390896 ~ 17392469 (-) | True | LOC110531963 |
| XR_005038398.1 | mRNA | upstream | 49916 | 17428277 ~ 17436513 (-) | True | LOC118942412 |
| XM_021570393.2 | mRNA | upstream | 138306 | 17516667 ~ 17518593 (-) | False | LOC110495007 |
| XM_036956644.1 | mRNA | upstream | 138306 | 17516667 ~ 17518593 (-) | True | LOC110495007 |
| XM_021615521.2 | mRNA | upstream | 223351 | 17601712 ~ 17619924 (-) | True | LOC110531970 |
| TU18952 | other | downstream | 120514 | 17255236 ~ 17257241 (-) | True | G16161 |
| TU18890 | other | downstream | 241398 | 17131420 ~ 17136357 (-) | False | G16100 |
| TU18891 | other | downstream | 241398 | 17131721 ~ 17136357 (-) | False | G16100 |
| TU18888 | other | downstream | 241398 | 17131803 ~ 17136357 (-) | False | G16100 |
| TU18315 | other | downstream | 505827 | 16860649 ~ 16871928 (-) | True | LOC110492105 |
| TU19906 | other | upstream | 711519 | 18089880 ~ 18094938 (-) | False | LOC110497564 |
| TU19908 | other | upstream | 711519 | 18089880 ~ 18094938 (-) | False | LOC110497564 |
| TU19904 | other | upstream | 714794 | 18093155 ~ 18094938 (-) | True | LOC110497564 |
| TU20793 | other | upstream | 1011762 | 18390123 ~ 18391533 (-) | False | LOC110497762 |
| TU20791 | other | upstream | 1013271 | 18391632 ~ 18394860 (-) | True | LOC110497762 |
