Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU19717 |
| length | 790 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G16809 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 17974130 ~ 17974919 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU19733 | lncRNA | upstream | 15508 | 17958398 ~ 17958622 (+) | True | G16825 |
| TU19392 | lncRNA | upstream | 43546 | 17930238 ~ 17930584 (+) | True | G16510 |
| TU19387 | lncRNA | upstream | 48690 | 17924985 ~ 17925440 (+) | True | G16505 |
| TU19385 | lncRNA | upstream | 50674 | 17923201 ~ 17923456 (+) | True | G16503 |
| TU19384 | lncRNA | upstream | 51790 | 17922052 ~ 17922340 (+) | True | G16502 |
| TU19715 | lncRNA | downstream | 1045 | 17975964 ~ 17988833 (+) | False | ccdc124 |
| TU19718 | lncRNA | downstream | 30359 | 18005278 ~ 18007518 (+) | True | G16810 |
| TU19719 | lncRNA | downstream | 34061 | 18008980 ~ 18011312 (+) | True | G16811 |
| TU19870 | lncRNA | downstream | 94519 | 18069438 ~ 18069653 (+) | True | G16933 |
| TU19883 | lncRNA | downstream | 119746 | 18094665 ~ 18095197 (+) | True | G16946 |
| XM_036958559.1 | mRNA | upstream | 30631 | 17914509 ~ 17943499 (+) | False | slc5a5 |
| XM_021573060.2 | mRNA | upstream | 30631 | 17914519 ~ 17943499 (+) | False | slc5a5 |
| XM_021573106.2 | mRNA | upstream | 30631 | 17932851 ~ 17943499 (+) | True | slc5a5 |
| XM_021572819.2 | mRNA | upstream | 113972 | 17856865 ~ 17860158 (+) | False | LOC110496754 |
| XM_021573446.2 | mRNA | downstream | 999 | 17975918 ~ 17988429 (+) | False | ccdc124 |
| XR_005038787.1 | mRNA | downstream | 18128 | 17993047 ~ 18001455 (+) | False | kcnn1b |
| XM_021573172.2 | mRNA | downstream | 18136 | 17993055 ~ 18002431 (+) | False | kcnn1b |
| XM_021573328.2 | mRNA | downstream | 22173 | 17997092 ~ 18002431 (+) | True | kcnn1b |
| XR_005038806.1 | mRNA | downstream | 101058 | 18075977 ~ 18096407 (+) | True | LOC118943582 |
| TU19135 | other | upstream | 309122 | 17654207 ~ 17665008 (+) | False | LOC110495874 |
| TU18429 | other | upstream | 1006340 | 16963057 ~ 16967790 (+) | True | LOC110492876 |
| TU18393 | other | upstream | 1053721 | 16916499 ~ 16920409 (+) | True | LOC110492606 |
| TU18087 | other | upstream | 1393248 | 16579086 ~ 16580882 (+) | True | LOC118941201 |
| TU17062 | other | upstream | 2258448 | 15695041 ~ 15715682 (+) | True | LOC110490510 |
| TU19716 | other | downstream | 1045 | 17975964 ~ 17991176 (+) | True | ccdc124 |
| TU20408 | other | downstream | 907804 | 18882723 ~ 18956208 (+) | True | G17420 |
| TU21562 | other | downstream | 1589930 | 19564849 ~ 19565221 (+) | True | G18481 |
| TU21568 | other | downstream | 1593866 | 19568785 ~ 19575028 (+) | True | LOC110502506 |
| TU22177 | other | downstream | 1888872 | 19863791 ~ 19865605 (+) | True | LOC110503939 |
