RNA id: TU21260



Basic Information


Item Value
RNA id TU21260
length 210
lncRNA type antisense_over
GC content 0.42
exon number 2
gene id G18199
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 19095032 ~ 19096204 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CCTCATCTCAGACAGAGCAGCCATCTCAGAGCTCACAGGGGTCACATACCCAGACATACTGGAACGGGAGTGCCTCTCTCTGAAGGAGGGATCATGTCAGGGGTCAGGGCCTGAGGAGGGTCCATGCCTTTGCTGACTTTCTGCTGGATGAAGTGCATGGCCAGAGCAAACTGCTCCCGCGTCAGCTTCCCCATCTGCCTGGTGTCTGCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU21247 lncRNA downstream 7216 19084211 ~ 19087816 (-) False G18191
TU21249 lncRNA downstream 7216 19084747 ~ 19087816 (-) True G18191
TU21246 lncRNA downstream 7448 19084211 ~ 19087584 (-) False G18191
TU21253 lncRNA downstream 11288 19083504 ~ 19083744 (-) True G18193
TU21252 lncRNA downstream 12531 19081769 ~ 19082501 (-) False G18192
TU21296 lncRNA upstream 61004 19157208 ~ 19157419 (-) True G18234
TU21298 lncRNA upstream 62081 19158285 ~ 19158548 (-) True G18236
TU21736 lncRNA upstream 162378 19258582 ~ 19258860 (-) True G18646
TU21796 lncRNA upstream 240841 19337045 ~ 19338926 (-) True G18700
TU21800 lncRNA upstream 247245 19343449 ~ 19343769 (-) True G18704
XM_036961982.1 mRNA downstream 24539 19064745 ~ 19070493 (-) False c1h19orf44
XM_021578124.2 mRNA downstream 25990 19064745 ~ 19069042 (-) False c1h19orf44
XM_021578727.2 mRNA upstream 32379 19128583 ~ 19131233 (-) True LOC110501271
XM_036962687.1 mRNA upstream 213501 19309705 ~ 19328997 (-) False LOC110501398
XM_021578979.2 mRNA upstream 213501 19309705 ~ 19334685 (-) False LOC110501398
XM_036962613.1 mRNA upstream 213501 19309705 ~ 19334685 (-) True LOC110501398
XM_036943822.1 mRNA upstream 244204 19340408 ~ 19342021 (-) False fam32a
TU21090 other downstream 209380 18876877 ~ 18885652 (-) True mydgf
TU20791 other downstream 700172 18391632 ~ 18394860 (-) True LOC110497762
TU20793 other downstream 703499 18390123 ~ 18391533 (-) False LOC110497762
TU19908 other downstream 1000094 18089880 ~ 18094938 (-) False LOC110497564
TU21902 other upstream 534289 19630493 ~ 19632617 (-) True LOC110502937
TU23634 other upstream 1702916 20799120 ~ 20800008 (-) True G20266
TU23821 other upstream 1989094 21085298 ~ 21089250 (-) False LOC118945319
TU23826 other upstream 1989094 21085298 ~ 21089250 (-) False LOC118945319
TU23814 other upstream 1989264 21085468 ~ 21089250 (-) False LOC118945319

Expression Profile