RNA id: TCONS_00026501


Basic Information

Item Value
RNA id TCONS_00026501
length 115
RNA type rRNA
GC content 0.50
exon number 1
gene id XLOC_013417
representative True

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 22083772 ~ 22083886 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gctggcagctagctcttttTAActttcacatggtcacccactgaagctaagcaagactgtgcccagtcagtacctggataggagaccacatgggaaagctaggttgctgccagaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000185597

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00026499 lncRNA downstream 136600 21944205 ~ 21947172 (-) True XLOC_013415
TCONS_00026498 lncRNA downstream 147197 21932253 ~ 21936575 (-) False XLOC_013415
TCONS_00026963 lncRNA downstream 915654 21164826 ~ 21168118 (-) False XLOC_013403
TCONS_00026962 lncRNA downstream 915654 21164826 ~ 21168118 (-) True XLOC_013403
TCONS_00026461 lncRNA downstream 1475535 20598064 ~ 20608237 (-) False XLOC_013393
TCONS_00027296 lncRNA upstream 466709 22550595 ~ 22552314 (-) True XLOC_013420
TCONS_00027297 lncRNA upstream 1102843 23186729 ~ 23188209 (-) False XLOC_013428
TCONS_00027298 lncRNA upstream 1102843 23186729 ~ 23188268 (-) False XLOC_013428
TCONS_00027300 lncRNA upstream 1102843 23186729 ~ 23188301 (-) False XLOC_013428
TCONS_00027299 lncRNA upstream 1102843 23186729 ~ 23188301 (-) False XLOC_013428
TCONS_00026497 mRNA downstream 133021 21931741 ~ 21950751 (-) False XLOC_013415
TCONS_00026495 mRNA downstream 154321 21913685 ~ 21929451 (-) False XLOC_013414
TCONS_00026496 mRNA downstream 154346 21913995 ~ 21929426 (-) True XLOC_013414
TCONS_00026492 mRNA downstream 172781 21858744 ~ 21910991 (-) False XLOC_013413
TCONS_00026491 mRNA downstream 172781 21858744 ~ 21910991 (-) False XLOC_013413
TCONS_00026502 mRNA upstream 65675 22149561 ~ 22150663 (-) True XLOC_013418
TCONS_00026503 mRNA upstream 321821 22405707 ~ 22414565 (-) True XLOC_013419
TCONS_00026505 mRNA upstream 611521 22695407 ~ 22696357 (-) False XLOC_013421
TCONS_00026506 mRNA upstream 611525 22695411 ~ 22696170 (-) True XLOC_013421
TCONS_00026507 mRNA upstream 617144 22701030 ~ 22701983 (-) False XLOC_013422
TCONS_00026485 other downstream 363721 21712296 ~ 21720051 (-) True XLOC_013411
TCONS_00026472 other downstream 1059201 21020911 ~ 21024571 (-) True XLOC_013400
TCONS_00026468 other downstream 1237459 20846190 ~ 20846313 (-) True XLOC_013398
TCONS_00026464 other downstream 1449849 20633789 ~ 20633923 (-) True XLOC_013395
TCONS_00026460 other downstream 1489530 20585090 ~ 20594242 (-) False XLOC_013393
TCONS_00026504 other upstream 466709 22550595 ~ 22552256 (-) False XLOC_013420
TCONS_00026513 other upstream 655846 22739732 ~ 22743366 (-) False XLOC_013426
TCONS_00026516 other upstream 775593 22859479 ~ 22862467 (-) True XLOC_013427
TCONS_00026523 other upstream 1789458 23873344 ~ 24023013 (-) False XLOC_013432
TCONS_00026525 other upstream 2189542 24273428 ~ 24476114 (-) False XLOC_013435