RNA id: TCONS_00026502


Basic Information

Item Value
RNA id TCONS_00026502
length 531
RNA type mRNA
GC content 0.29
exon number 2
gene id XLOC_013418
representative True

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 22149561 ~ 22150663 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gtctttaaaaggatggggctcttataccatatgtgaagttacctattcaggtgctttttggggaccagtttggagatggaagacagacgaagtcaaagaagcagagaagacacatcaaccagcaagtgtgtaaaattatcaggaaaatgattgaccttgaatagacgactgcctaatttagcaagaagttttgtctctctctctcatgtgtatgtgtatatatatatatatatatatatatatatatatatatatatatatatatatatatgtatgtatgtatgtatgtatgtatgtatgtatatatatatatatatatatatatatatatatatatatatatatgagagagagagagagagagagcgcactctgaagcactgctttttatatgtatgctacatatgttgtcagatttttttattaatatgttcttatagtattttttgaggcttcaccttcaccttttgaaagttttctgaaatgtttacacagatgtcattaagctgttaaataaatctgtaaaatgta

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000140046

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00026499 lncRNA downstream 202389 21944205 ~ 21947172 (-) True XLOC_013415
TCONS_00026498 lncRNA downstream 212986 21932253 ~ 21936575 (-) False XLOC_013415
TCONS_00026963 lncRNA downstream 981443 21164826 ~ 21168118 (-) False XLOC_013403
TCONS_00026962 lncRNA downstream 981443 21164826 ~ 21168118 (-) True XLOC_013403
TCONS_00026461 lncRNA downstream 1541324 20598064 ~ 20608237 (-) False XLOC_013393
TCONS_00027296 lncRNA upstream 399932 22550595 ~ 22552314 (-) True XLOC_013420
TCONS_00027297 lncRNA upstream 1036066 23186729 ~ 23188209 (-) False XLOC_013428
TCONS_00027298 lncRNA upstream 1036066 23186729 ~ 23188268 (-) False XLOC_013428
TCONS_00027300 lncRNA upstream 1036066 23186729 ~ 23188301 (-) False XLOC_013428
TCONS_00027299 lncRNA upstream 1036066 23186729 ~ 23188301 (-) False XLOC_013428
TCONS_00026500 mRNA downstream 55459 22028674 ~ 22094102 (-) True XLOC_013416
TCONS_00026497 mRNA downstream 198810 21931741 ~ 21950751 (-) False XLOC_013415
TCONS_00026495 mRNA downstream 220110 21913685 ~ 21929451 (-) False XLOC_013414
TCONS_00026496 mRNA downstream 220135 21913995 ~ 21929426 (-) True XLOC_013414
TCONS_00026493 mRNA downstream 238570 21860517 ~ 21910991 (-) False XLOC_013413
TCONS_00026503 mRNA upstream 255044 22405707 ~ 22414565 (-) True XLOC_013419
TCONS_00026505 mRNA upstream 544744 22695407 ~ 22696357 (-) False XLOC_013421
TCONS_00026506 mRNA upstream 544748 22695411 ~ 22696170 (-) True XLOC_013421
TCONS_00026507 mRNA upstream 550367 22701030 ~ 22701983 (-) False XLOC_013422
TCONS_00026508 mRNA upstream 550406 22701069 ~ 22701800 (-) True XLOC_013422
TCONS_00026501 other downstream 65675 22083772 ~ 22083886 (-) True XLOC_013417
TCONS_00026485 other downstream 429510 21712296 ~ 21720051 (-) True XLOC_013411
TCONS_00026472 other downstream 1124990 21020911 ~ 21024571 (-) True XLOC_013400
TCONS_00026468 other downstream 1303248 20846190 ~ 20846313 (-) True XLOC_013398
TCONS_00026464 other downstream 1515638 20633789 ~ 20633923 (-) True XLOC_013395
TCONS_00026504 other upstream 399932 22550595 ~ 22552256 (-) False XLOC_013420
TCONS_00026513 other upstream 589069 22739732 ~ 22743366 (-) False XLOC_013426
TCONS_00026516 other upstream 708816 22859479 ~ 22862467 (-) True XLOC_013427
TCONS_00026523 other upstream 1722681 23873344 ~ 24023013 (-) False XLOC_013432
TCONS_00026525 other upstream 2122765 24273428 ~ 24476114 (-) False XLOC_013435

Expression Profile

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