RNA id: TCONS_00026505


Basic Information

Item Value
RNA id TCONS_00026505
length 951
RNA type mRNA
GC content 0.41
exon number 1
gene id XLOC_013421
representative False

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 22695407 ~ 22696357 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGGACTCAGAATTAAGCTTCAATTCAACATCTGACAGCACTGTTGTGGATTCAGAGAAGATCGCTCCTGCTGTAGTTCTGGGTTTGTGTTGTTTGGTGGGTTTGCCGAGCAACATTGCAGTAATCGTCAACATTGCTCGTGAGTGGAACACAAATCTGAGCTTCACTTTAAAACTGATGCTCAACCTTTCAGTTTCTGATGCTTTGAGTCTTTGCTTGGCTCCATTTGTGCTGTTTGCAATACTATTTGGATGGAAATTCGGCCTGTGGTTTTGTAGAATCCTGTTCTTCTTGGGTCACTGGAGTCTGTATGTTGGCGTCCTGACGGTTACGTCAATGAGTGTGCACCGCTATCACAATGTCATCAAGTCAAGGGTCACTAATAGGACAATTCTGCACAGACTGGAGCGACGACACAGACACCTTCAGCTGATCTGCATCTGGACTCTCGCCTTTGTTTTTGCCCTACCAGTTTATTTTACTCAAGAACTTAAAGACAAAGATGGATTCCAAAGATGTCAGAGGACAATGAGCTCAATGGCTGTAGGTGTGACTGTATTACTTCTTGAGATCCTGTTGGGGTTTATCATTCCATTTTTAACTATGTTGACATGTTATCTGTGGTTGCACAAAGGATTGAGACAAAACTCGAGTTTAAACAGAGCTCCACAGAAACAGGAATCCAGAAACAAGGGGTCAAACATTAGAACTTACAAGAAGAGACTTGTGGTCAACATTGTTGTGGCTTTCTTTGTATTTTGGACTCCTGTGCACATCACCAATGTGATTGATATAGTCATTACGCTGACTAATGCAGATGATCATTCACAGCTGAAAACTTTTCGTCATGTTTATGGTGACGCAAGCAAGGCTCTCGCTTTACTAAACTGCTGTCTGAATCCTTTTCtctatgtttttatttcaaggaatgttttaaaatgtatcaagTGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000100955

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00027296 lncRNA downstream 143093 22550595 ~ 22552314 (-) True XLOC_013420
TCONS_00026499 lncRNA downstream 748235 21944205 ~ 21947172 (-) True XLOC_013415
TCONS_00026498 lncRNA downstream 758832 21932253 ~ 21936575 (-) False XLOC_013415
TCONS_00026963 lncRNA downstream 1527289 21164826 ~ 21168118 (-) False XLOC_013403
TCONS_00026962 lncRNA downstream 1527289 21164826 ~ 21168118 (-) True XLOC_013403
TCONS_00027297 lncRNA upstream 490372 23186729 ~ 23188209 (-) False XLOC_013428
TCONS_00027298 lncRNA upstream 490372 23186729 ~ 23188268 (-) False XLOC_013428
TCONS_00027300 lncRNA upstream 490372 23186729 ~ 23188301 (-) False XLOC_013428
TCONS_00027299 lncRNA upstream 490372 23186729 ~ 23188301 (-) False XLOC_013428
TCONS_00026517 lncRNA upstream 490372 23186729 ~ 23189925 (-) False XLOC_013428
TCONS_00026503 mRNA downstream 280842 22405707 ~ 22414565 (-) True XLOC_013419
TCONS_00026502 mRNA downstream 544744 22149561 ~ 22150663 (-) True XLOC_013418
TCONS_00026500 mRNA downstream 601305 22028674 ~ 22094102 (-) True XLOC_013416
TCONS_00026497 mRNA downstream 744656 21931741 ~ 21950751 (-) False XLOC_013415
TCONS_00026495 mRNA downstream 765956 21913685 ~ 21929451 (-) False XLOC_013414
TCONS_00026507 mRNA upstream 4673 22701030 ~ 22701983 (-) False XLOC_013422
TCONS_00026508 mRNA upstream 4712 22701069 ~ 22701800 (-) True XLOC_013422
TCONS_00026509 mRNA upstream 16281 22712638 ~ 22713621 (-) False XLOC_013423
TCONS_00026510 mRNA upstream 16326 22712683 ~ 22713402 (-) True XLOC_013423
TCONS_00026511 mRNA upstream 20351 22716708 ~ 22717673 (-) True XLOC_013424
TCONS_00026504 other downstream 143151 22550595 ~ 22552256 (-) False XLOC_013420
TCONS_00026501 other downstream 611521 22083772 ~ 22083886 (-) True XLOC_013417
TCONS_00026485 other downstream 975356 21712296 ~ 21720051 (-) True XLOC_013411
TCONS_00026472 other downstream 1670836 21020911 ~ 21024571 (-) True XLOC_013400
TCONS_00026468 other downstream 1849094 20846190 ~ 20846313 (-) True XLOC_013398
TCONS_00026513 other upstream 43375 22739732 ~ 22743366 (-) False XLOC_013426
TCONS_00026516 other upstream 163122 22859479 ~ 22862467 (-) True XLOC_013427
TCONS_00026523 other upstream 1176987 23873344 ~ 24023013 (-) False XLOC_013432
TCONS_00026525 other upstream 1577071 24273428 ~ 24476114 (-) False XLOC_013435
TCONS_00026526 other upstream 1619824 24316181 ~ 24316299 (-) True XLOC_013436