RNA id: TU25437



Basic Information


Item Value
RNA id TU25437
length 214
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G21913
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 22265216 ~ 22265429 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


acattattccatttctgttagtcacatcatgtctgtagaacttgtttagtttatgtctcagttgttgaatcttgttatgttcaaacaaatatttacacatgtcaagtttgctgaaaataaacgcagttgacagtgagaggacgtttctttttttgctgagttaagtTAGTCTGATAATGCATTTTTTAATGAGAAAATGAAAAGTCATTGAATC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU25428 lncRNA downstream 11964 22252962 ~ 22253252 (-) True G21904
TU25424 lncRNA downstream 16149 22248833 ~ 22249067 (-) True G21900
TU25349 lncRNA downstream 49772 22212443 ~ 22215444 (-) True G21827
TU25352 lncRNA downstream 147547 22117161 ~ 22117669 (-) True G21830
TU24709 lncRNA downstream 308735 21956271 ~ 21956481 (-) True G21223
TU25441 lncRNA upstream 2333 22267762 ~ 22267965 (-) True G21917
TU25479 lncRNA upstream 52053 22317482 ~ 22317947 (-) True G21954
TU25481 lncRNA upstream 54447 22319876 ~ 22320089 (-) True G21956
TU25489 lncRNA upstream 69408 22334837 ~ 22335094 (-) True G21964
TU25507 lncRNA upstream 95214 22360643 ~ 22360908 (-) True G21982
LOC118966627 mRNA downstream 33618 22226205 ~ 22231598 (-) True LOC118966627
XM_021589510.2 mRNA downstream 61591 22111004 ~ 22203625 (-) True LOC110508721
LOC110532081 mRNA downstream 531930 21686077 ~ 21733286 (-) True LOC110532081
XM_021588545.2 mRNA downstream 660787 21587517 ~ 21604429 (-) False LOC110508066
XR_002471392.2 mRNA upstream 127549 22392978 ~ 22400311 (-) False LOC110508988
XR_002471395.2 mRNA upstream 127549 22392978 ~ 22400323 (-) False LOC110508988
XM_021590202.2 mRNA upstream 169246 22434675 ~ 22437595 (-) True LOC110509244
XM_021590377.2 mRNA upstream 197966 22463395 ~ 22487546 (-) False LOC110509312
XM_021590261.2 mRNA upstream 197966 22463395 ~ 22487547 (-) False LOC110509312
TU24399 other downstream 717443 21535933 ~ 21547773 (-) True LOC110507736
TU23814 other downstream 1175966 21085468 ~ 21089250 (-) False LOC118945319
TU25520 other upstream 116441 22381870 ~ 22382208 (-) True G21993
TU25921 other upstream 574416 22839845 ~ 22843305 (-) True G22350
TU26999 other upstream 1358597 23624026 ~ 23624349 (-) True G23394
TU27396 other upstream 1557271 23822700 ~ 23826491 (-) True LOC110511130
TU28304 other upstream 1957478 24222907 ~ 24226490 (-) True G24542

Expression Profile