RNA id: TCONS_00026508


Basic Information

Item Value
RNA id TCONS_00026508
length 732
RNA type mRNA
GC content 0.44
exon number 1
gene id XLOC_013422
representative True

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 22701030 ~ 22701983 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AACCTCGCGGTCTCTGATGCTTTGAGTCTTTGCTTGGCTCCTTTTGTGATGTTTGGAATATGGTTTGGATGGAAATTCGGCCTGTGGGTTTGTAGGATCCTGCTCTTCATCGGTCACTGGAGCCTGTATGTTGGTGTCCTGACGGTGACGTCCATGAGTGTGCACCGCTATCACAATGTCATCAAGTCAAGGGTTGCTAACAGGATGATTTTGCAAAGGCTGGAACGACGACACAGACACCTTCAGCTGATCTGCATCTGGACTCTCGCCTTTGTTTTTGCCCTACCAGTGTTTTTCACCCAAGGACTAAAAGAAAAGAATGGCTTGCAAAGATGTCAGAGGACAGTGAGCTCACAGTTTGTGGCAGtggctcttcttcttcttcagatATTGTTGGGGTTTATTATTCCATTTTTAATAATGTTGACATTTTATCTGTGGTTGCACAAAGGTTTGCGTCAAACCTCCAGGTTAGCTCCACAGGAGCAGGAATCTAGAAACAAGGGGTCAAACGTTAGAACTTACAAAAAAAGACTTGTGATCAGCGTCGTTGTGGCTTTCTTTCTGTTTTGGACTCCTGTGCACATCATCAATGTCATTGACATTGTCGCTACTTTGACTAAAACATCTCATCAAGATGTTTATTCACGTCTAAAGTCTTTCCGTCGTGTTTATGGTGACACAAGCAAGGCTCTCGCTTTACTAAACTGCTGTTTAGATCCTTttctttat

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000135098

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00027296 lncRNA downstream 148755 22550595 ~ 22552314 (-) True XLOC_013420
TCONS_00026499 lncRNA downstream 753897 21944205 ~ 21947172 (-) True XLOC_013415
TCONS_00026498 lncRNA downstream 764494 21932253 ~ 21936575 (-) False XLOC_013415
TCONS_00026963 lncRNA downstream 1532951 21164826 ~ 21168118 (-) False XLOC_013403
TCONS_00027297 lncRNA upstream 484929 23186729 ~ 23188209 (-) False XLOC_013428
TCONS_00027298 lncRNA upstream 484929 23186729 ~ 23188268 (-) False XLOC_013428
TCONS_00027300 lncRNA upstream 484929 23186729 ~ 23188301 (-) False XLOC_013428
TCONS_00027299 lncRNA upstream 484929 23186729 ~ 23188301 (-) False XLOC_013428
TCONS_00026517 lncRNA upstream 484929 23186729 ~ 23189925 (-) False XLOC_013428
TCONS_00026505 mRNA downstream 4712 22695407 ~ 22696357 (-) False XLOC_013421
TCONS_00026506 mRNA downstream 4899 22695411 ~ 22696170 (-) True XLOC_013421
TCONS_00026503 mRNA downstream 286504 22405707 ~ 22414565 (-) True XLOC_013419
TCONS_00026502 mRNA downstream 550406 22149561 ~ 22150663 (-) True XLOC_013418
TCONS_00026500 mRNA downstream 606967 22028674 ~ 22094102 (-) True XLOC_013416
TCONS_00026509 mRNA upstream 10838 22712638 ~ 22713621 (-) False XLOC_013423
TCONS_00026510 mRNA upstream 10883 22712683 ~ 22713402 (-) True XLOC_013423
TCONS_00026511 mRNA upstream 14908 22716708 ~ 22717673 (-) True XLOC_013424
TCONS_00026512 mRNA upstream 19751 22721551 ~ 22735002 (-) True XLOC_013425
TCONS_00026514 mRNA upstream 37932 22739732 ~ 22753637 (-) False XLOC_013426
TCONS_00026504 other downstream 148813 22550595 ~ 22552256 (-) False XLOC_013420
TCONS_00026501 other downstream 617183 22083772 ~ 22083886 (-) True XLOC_013417
TCONS_00026485 other downstream 981018 21712296 ~ 21720051 (-) True XLOC_013411
TCONS_00026472 other downstream 1676498 21020911 ~ 21024571 (-) True XLOC_013400
TCONS_00026468 other downstream 1854756 20846190 ~ 20846313 (-) True XLOC_013398
TCONS_00026513 other upstream 37932 22739732 ~ 22743366 (-) False XLOC_013426
TCONS_00026516 other upstream 157679 22859479 ~ 22862467 (-) True XLOC_013427
TCONS_00026523 other upstream 1171544 23873344 ~ 24023013 (-) False XLOC_013432
TCONS_00026525 other upstream 1571628 24273428 ~ 24476114 (-) False XLOC_013435
TCONS_00026526 other upstream 1614381 24316181 ~ 24316299 (-) True XLOC_013436

Expression Profile

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