RNA id: TU25663



Basic Information


Item Value
RNA id TU25663
length 201
lncRNA type antisense_over
GC content 0.42
exon number 1
gene id G22116
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 22621125 ~ 22621325 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTTAAGTATTACTCTTTAAATCATGACTACAGTGAACTATGTACTCACCTTGCAAGGTTAAAAGGATCATCCACCAATTGAGCTCCATTGATAACTGGAATTGACGAGACAAAAACCACTAACATCAGCATTAATTACTTTTTTTTCTAACAAGACAATAATTTGGGATGGAATAGATTGTGTGTTCATCAATGGCTTACC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU25661 lncRNA downstream 3282 22617535 ~ 22617843 (-) True G22114
TU25646 lncRNA downstream 26098 22594783 ~ 22595027 (-) True G22099
TU25596 lncRNA downstream 41469 22576822 ~ 22579656 (-) True G22053
TU25595 lncRNA downstream 45174 22575603 ~ 22575951 (-) True G22052
TU25639 lncRNA downstream 51153 22568042 ~ 22569972 (-) True G22092
TU25674 lncRNA upstream 15002 22636327 ~ 22636563 (-) True G22127
TU25680 lncRNA upstream 24129 22645454 ~ 22645678 (-) True G22133
TU25686 lncRNA upstream 27456 22648781 ~ 22649016 (-) True LOC110532107
TU25728 lncRNA upstream 91208 22712533 ~ 22712738 (-) True G22181
TU26184 lncRNA upstream 425234 23046559 ~ 23046779 (-) True G22590
XM_021590779.2 mRNA downstream 28480 22580312 ~ 22592645 (-) False LOC110509695
XM_021615713.2 mRNA upstream 17909 22639234 ~ 22639992 (-) True LOC110532100
XM_021615727.2 mRNA upstream 18844 22640169 ~ 22649593 (-) False LOC110532107
XM_021591461.2 mRNA upstream 34192 22655517 ~ 22690684 (-) False LOC110510003
XM_021591303.2 mRNA upstream 34192 22655517 ~ 22690689 (-) False LOC110510003
XM_021591382.2 mRNA upstream 34192 22655517 ~ 22696514 (-) False LOC110510003
TU25520 other downstream 238917 22381870 ~ 22382208 (-) True G21993
TU24399 other downstream 1073352 21535933 ~ 21547773 (-) True LOC110507736
TU23817 other downstream 1531875 21085468 ~ 21089250 (-) False LOC118945319
TU25921 other upstream 218520 22839845 ~ 22843305 (-) True G22350
TU26999 other upstream 1002701 23624026 ~ 23624349 (-) True G23394
TU27396 other upstream 1201375 23822700 ~ 23826491 (-) True LOC110511130
TU28304 other upstream 1601582 24222907 ~ 24226490 (-) True G24542
TU28501 other upstream 1931266 24552591 ~ 24553562 (-) True LOC110514811

Expression Profile