RNA id: TCONS_00026513


Basic Information

Item Value
RNA id TCONS_00026513
length 730
RNA type processed_transcript
GC content 0.40
exon number 2
gene id XLOC_013426
representative False

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 22739732 ~ 22753637 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GAACTGGCTAATGCCCTCATCCCTGCTGCTGTGTCCCAATACATGTTTCAGGGTCAGGAGGGAGAGCTGTACCCCACCGCTGGCTATGAAGAGCAGTAAAGCCCTGATGCGACAGCCAGCAGAGATCCCTCCTGAGAGACGAGCAGATTCACTTGAAAACATGGCACTTGGATTGTACAATATCCCAACAACAGAAGACTCCAATTTACCTGACACTTGCAGATGATATATTTAGTAAACTTATCAAGTGACCGGCCCTTCATGAAGACTCACAAGATGAAgcgtgtattttttttaaaaacatctaaagCACATCAATTCACTGAAGATGGAATATTTACAAAACCCCTTCTCAAGGAATTCAGGCTACATCAAGATCATTCTGAAGATATTTTTCCTACAATAAAATGCATCCCATGGACACACCTGTTGCCAAAGAAAAGGCAATACTGAGTATTTCCCTCCTTGACGACTACAATGCATGTGAACTGTTTGCGATATGACGTAATTGATCGTGGCACAAGTTTGAATGCACTTTAGTCTGTGTGTTGGAGTTCCTGCTTTGTGGAGCTGTGATTTCATTTTCCCTAAAATTGACATTATAATGAAGCACACGCTTGtatttcaatttatatatatatctatatttgaAGGCATATAAAAAGTACAGGTTTAATcatattatgtatgtatttacgTGAGAGGTCTAGGGGTTCAAAATCAGACCTCG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000143224

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00027296 lncRNA downstream 187418 22550595 ~ 22552314 (-) True XLOC_013420
TCONS_00026499 lncRNA downstream 792560 21944205 ~ 21947172 (-) True XLOC_013415
TCONS_00026498 lncRNA downstream 803157 21932253 ~ 21936575 (-) False XLOC_013415
TCONS_00026963 lncRNA downstream 1571614 21164826 ~ 21168118 (-) False XLOC_013403
TCONS_00026962 lncRNA downstream 1571614 21164826 ~ 21168118 (-) True XLOC_013403
TCONS_00027297 lncRNA upstream 443363 23186729 ~ 23188209 (-) False XLOC_013428
TCONS_00027298 lncRNA upstream 443363 23186729 ~ 23188268 (-) False XLOC_013428
TCONS_00027300 lncRNA upstream 443363 23186729 ~ 23188301 (-) False XLOC_013428
TCONS_00027299 lncRNA upstream 443363 23186729 ~ 23188301 (-) False XLOC_013428
TCONS_00026517 lncRNA upstream 443363 23186729 ~ 23189925 (-) False XLOC_013428
TCONS_00026512 mRNA downstream 4730 22721551 ~ 22735002 (-) True XLOC_013425
TCONS_00026511 mRNA downstream 22059 22716708 ~ 22717673 (-) True XLOC_013424
TCONS_00026509 mRNA downstream 26111 22712638 ~ 22713621 (-) False XLOC_013423
TCONS_00026510 mRNA downstream 26330 22712683 ~ 22713402 (-) True XLOC_013423
TCONS_00026507 mRNA downstream 37749 22701030 ~ 22701983 (-) False XLOC_013422
TCONS_00026515 mRNA upstream 3140 22746506 ~ 22753637 (-) True XLOC_013426
TCONS_00026521 mRNA upstream 1125284 23868650 ~ 23875370 (-) False XLOC_013432
TCONS_00026522 mRNA upstream 1127036 23870402 ~ 23875219 (-) False XLOC_013432
TCONS_00026524 mRNA upstream 1130089 23873455 ~ 23874929 (-) False XLOC_013432
TCONS_00026532 mRNA upstream 2190107 24933473 ~ 24989580 (-) False XLOC_013440
TCONS_00026504 other downstream 187476 22550595 ~ 22552256 (-) False XLOC_013420
TCONS_00026501 other downstream 655846 22083772 ~ 22083886 (-) True XLOC_013417
TCONS_00026485 other downstream 1019681 21712296 ~ 21720051 (-) True XLOC_013411
TCONS_00026472 other downstream 1715161 21020911 ~ 21024571 (-) True XLOC_013400
TCONS_00026468 other downstream 1893419 20846190 ~ 20846313 (-) True XLOC_013398
TCONS_00026516 other upstream 116113 22859479 ~ 22862467 (-) True XLOC_013427
TCONS_00026523 other upstream 1129978 23873344 ~ 24023013 (-) False XLOC_013432
TCONS_00026525 other upstream 1530062 24273428 ~ 24476114 (-) False XLOC_013435
TCONS_00026526 other upstream 1572815 24316181 ~ 24316299 (-) True XLOC_013436
TCONS_00026527 other upstream 1644653 24388019 ~ 24476883 (-) False XLOC_013435

Expression Profile

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