RNA id: TU26999



Basic Information


Item Value
RNA id TU26999
length 324
RNA type TUCP
GC content 0.45
exon number 1
gene id G23394
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 23624026 ~ 23624349 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gttccgctggtcattttgtcacttcatgtccagtaaaagccagagctcatcagtaagcggagggctactggtgagcgctactactcatgtctctccttcaagatcctgcactaccttgtcggtccatctacgctggaccggttcgtcagcttcctgcagtgccttaatagactctggggcggagggctgttttatggacgagacctgggctcgggaacatgacattcctctcagacagttaagggagcccacggccttgttcgccttggatggtagtcctctccccaggattcagcgtgagacgctacctttaaccctcactgt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU26986 lncRNA downstream 18192 23605524 ~ 23605834 (-) True G23381
TU26985 lncRNA downstream 18921 23604716 ~ 23605105 (-) True G23380
TU26948 lncRNA downstream 68957 23554861 ~ 23555069 (-) True G23343
TU26940 lncRNA downstream 79533 23544271 ~ 23544493 (-) True G23335
TU26936 lncRNA downstream 84778 23538952 ~ 23539248 (-) True G23331
TU27002 lncRNA upstream 2037 23626386 ~ 23626645 (-) True G23397
TU27108 lncRNA upstream 81435 23705784 ~ 23705984 (-) True G23501
TU27125 lncRNA upstream 94171 23718520 ~ 23718838 (-) True G23518
TU27129 lncRNA upstream 96259 23720608 ~ 23720812 (-) True G23522
TU27375 lncRNA upstream 116931 23741280 ~ 23741509 (-) True G23742
XM_021591923.2 mRNA downstream 4251 23321071 ~ 23619775 (-) False LOC110510575
XM_021591958.2 mRNA downstream 4251 23321071 ~ 23619775 (-) False LOC110510575
XM_021591998.2 mRNA downstream 4251 23321071 ~ 23619775 (-) False LOC110510575
XM_021592045.2 mRNA downstream 4251 23321071 ~ 23619775 (-) False LOC110510575
XR_002471552.2 mRNA downstream 667633 22921567 ~ 22956393 (-) False LOC110510264
XM_021592107.2 mRNA upstream 144944 23769293 ~ 23774865 (-) True LOC110510928
XM_036972413.1 mRNA upstream 197307 23821656 ~ 23861028 (-) False LOC110511130
XM_036972417.1 mRNA upstream 197307 23821656 ~ 23861029 (-) False LOC110511130
XM_021592530.2 mRNA upstream 317546 23941895 ~ 23945943 (-) True LOC110511707
XM_021592581.2 mRNA upstream 356866 23981215 ~ 24015777 (-) True LOC110511826
TU25921 other downstream 780721 22839845 ~ 22843305 (-) True G22350
TU25520 other downstream 1241818 22381870 ~ 22382208 (-) True G21993
TU24399 other downstream 2076253 21535933 ~ 21547773 (-) True LOC110507736
TU23817 other downstream 2534776 21085468 ~ 21089250 (-) False LOC118945319
TU27396 other upstream 198351 23822700 ~ 23826491 (-) True LOC110511130
TU28304 other upstream 598558 24222907 ~ 24226490 (-) True G24542
TU28501 other upstream 928242 24552591 ~ 24553562 (-) True LOC110514811
TU28721 other upstream 1239738 24864087 ~ 24864834 (-) True znf276
TU28795 other upstream 1303999 24928348 ~ 24938701 (-) False LOC118956210

Expression Profile