RNA id: TU29186



Basic Information


Item Value
RNA id TU29186
length 200
lncRNA type antisense_over
GC content 0.51
exon number 1
gene id G25320
representative True

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 25454215 ~ 25454414 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GGGCGGGGCTGCGCATGTGTCTGTGCTCCAGGAAGGCAAACAGGCTCTGGAGGAAAAGATGCAGGGACAGGATGGCTCCGTACAGGCCGAAGGACAGGTGGTGCTGCTCTGTGTGGATGAACTGATAGCCAGTCACATAGGCCAGCAGGATCCCAAACAGCACCACTGTGGCGAACAGGGTGGTGGTTACGATATGCAGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU29164 lncRNA downstream 14086 25439803 ~ 25440129 (-) True G25298
TU29163 lncRNA downstream 15805 25438132 ~ 25438410 (-) True G25297
TU29152 lncRNA downstream 23272 25430730 ~ 25430943 (-) True G25286
TU29144 lncRNA downstream 28609 25425396 ~ 25425606 (-) True G25278
TU29139 lncRNA downstream 33253 25420677 ~ 25420962 (-) True G25273
TU29191 lncRNA upstream 2489 25456903 ~ 25457117 (-) True G25325
TU29194 lncRNA upstream 4269 25458683 ~ 25458943 (-) True G25328
TU29218 lncRNA upstream 7724 25462138 ~ 25462356 (-) True G25351
TU29245 lncRNA upstream 48770 25503184 ~ 25503490 (-) True G25378
TU29257 lncRNA upstream 56360 25510774 ~ 25510973 (-) True G25390
XM_021596861.2 mRNA downstream 72359 25372830 ~ 25381856 (-) False LOC110519951
XM_021596750.2 mRNA downstream 281629 25154725 ~ 25172586 (-) False kiaa0513
XM_021596802.2 mRNA downstream 281664 25154725 ~ 25172551 (-) False kiaa0513
LOC118959932 mRNA upstream 5328 25459742 ~ 25463093 (-) True LOC118959932
XM_036974449.1 mRNA upstream 19122 25473536 ~ 25485212 (-) True LOC110520001
XM_021596965.2 mRNA upstream 82701 25537115 ~ 25566593 (-) True LOC110520008
XM_021596976.2 mRNA upstream 225495 25679909 ~ 25712438 (-) True LOC110520015
LOC118966628 mRNA upstream 278541 25732955 ~ 25747219 (-) True LOC118966628
TU28962 other downstream 172197 25281604 ~ 25282018 (-) True G25117
TU28960 other downstream 173185 25280592 ~ 25281030 (-) True G25115
TU28762 other downstream 502828 24944908 ~ 24951387 (-) False LOC110518671
TU28795 other downstream 515514 24928348 ~ 24938701 (-) False LOC118956210
TU28721 other downstream 589381 24864087 ~ 24864834 (-) True znf276
TU32221 other upstream 2181674 27636088 ~ 27643120 (-) True LOC110520292
TU33047 other upstream 2603029 28057443 ~ 28062450 (-) False G28870
TU33049 other upstream 2603029 28057443 ~ 28066305 (-) True G28870
TU33578 other upstream 3249473 28703887 ~ 28704356 (-) True G29355
TU34164 other upstream 3825862 29280276 ~ 29280700 (-) True G29906

Expression Profile