Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU31561 |
| length | 1845 |
| lncRNA type | read_through |
| GC content | 0.44 |
| exon number | 4 |
| gene id | G27553 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 27257563 ~ 27316517 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
27,200,000
27,210,000
27,220,000
27,230,000
27,240,000
27,250,000
27,260,000
27,270,000
27,280,000
27,290,000
27,300,000
27,310,000
27,320,000
NC_048565.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU31536 | lncRNA | upstream | 21412 | 27229326 ~ 27236151 (+) | True | G27534 |
| TU31465 | lncRNA | upstream | 114888 | 27141275 ~ 27142675 (+) | True | G27485 |
| TU31443 | lncRNA | upstream | 122993 | 27133163 ~ 27134570 (+) | True | n4bp1 |
| TU31448 | lncRNA | upstream | 125696 | 27131658 ~ 27131867 (+) | True | G27469 |
| TU31446 | lncRNA | upstream | 130135 | 27127033 ~ 27127428 (+) | True | G27467 |
| TU31613 | lncRNA | downstream | 6746 | 27323263 ~ 27328250 (+) | True | G27597 |
| TU31621 | lncRNA | downstream | 25157 | 27341674 ~ 27342123 (+) | True | G27604 |
| TU31674 | lncRNA | downstream | 125267 | 27441784 ~ 27445410 (+) | True | G27649 |
| TU31680 | lncRNA | downstream | 172073 | 27488590 ~ 27493843 (+) | True | G27653 |
| TU31689 | lncRNA | downstream | 179915 | 27496432 ~ 27498018 (+) | True | G27655 |
| XM_021597135.2 | mRNA | upstream | 86220 | 27152820 ~ 27171343 (+) | False | LOC110520078 |
| XM_021597126.2 | mRNA | upstream | 86220 | 27152925 ~ 27171343 (+) | False | LOC110520078 |
| XM_021597112.2 | mRNA | upstream | 86220 | 27161546 ~ 27171343 (+) | True | LOC110520078 |
| XM_021597099.2 | mRNA | upstream | 122543 | 27122394 ~ 27135020 (+) | False | n4bp1 |
| XM_021597084.2 | mRNA | upstream | 306471 | 26944223 ~ 26951092 (+) | True | LOC110520069 |
| XM_021597215.2 | mRNA | downstream | 45330 | 27361847 ~ 27371718 (+) | True | LOC110520128 |
| XM_021597296.2 | mRNA | downstream | 76007 | 27392524 ~ 27404744 (+) | False | LOC110520156 |
| XM_021597317.2 | mRNA | downstream | 76397 | 27392914 ~ 27404745 (+) | False | LOC110520156 |
| XM_036974811.1 | mRNA | downstream | 76404 | 27392921 ~ 27404745 (+) | False | LOC110520156 |
| XM_036974793.1 | mRNA | downstream | 76691 | 27393208 ~ 27404745 (+) | False | LOC110520156 |
| TU30765 | other | upstream | 570765 | 26680291 ~ 26686798 (+) | True | si:ch211-216l23.2 |
| TU30794 | other | upstream | 601965 | 26655297 ~ 26655598 (+) | True | G26858 |
| TU29432 | other | upstream | 1525364 | 25712571 ~ 25732199 (+) | True | LOC110520022 |
| TU29188 | other | upstream | 1801446 | 25455647 ~ 25456117 (+) | True | LOC110519986 |
| TU28083 | other | upstream | 2089235 | 25167817 ~ 25168328 (+) | True | G24365 |
| TU31782 | other | downstream | 245802 | 27562319 ~ 27562863 (+) | False | LOC110520258 |
| TU31781 | other | downstream | 246864 | 27563381 ~ 27565152 (+) | True | LOC110520258 |
| TU32393 | other | downstream | 528123 | 27844640 ~ 27845011 (+) | True | G28280 |
| TU32398 | other | downstream | 537240 | 27853757 ~ 27854954 (+) | True | G28285 |
| TU32543 | other | downstream | 731109 | 28047626 ~ 28048362 (+) | True | G28416 |
