Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU32824 |
| length | 1948 |
| lncRNA type | antisense_over |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G28653 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 28535167 ~ 28610883 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
28,460,000
28,470,000
28,480,000
28,490,000
28,500,000
28,510,000
28,520,000
28,530,000
28,540,000
28,550,000
28,560,000
28,570,000
28,580,000
28,590,000
28,600,000
28,610,000
NC_048565.1
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| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU32805 | lncRNA | upstream | 35219 | 28499725 ~ 28499948 (+) | True | G28638 |
| TU32802 | lncRNA | upstream | 37800 | 28497052 ~ 28497367 (+) | True | G28636 |
| TU32624 | lncRNA | upstream | 327138 | 28158869 ~ 28208029 (+) | True | G28480 |
| TU33441 | lncRNA | downstream | 66343 | 28677226 ~ 28677802 (+) | True | G29227 |
| TU33443 | lncRNA | downstream | 69299 | 28680182 ~ 28680381 (+) | True | G29229 |
| TU33450 | lncRNA | downstream | 80126 | 28691009 ~ 28691516 (+) | True | G29236 |
| TU33453 | lncRNA | downstream | 81806 | 28692689 ~ 28692984 (+) | True | G29239 |
| TU33454 | lncRNA | downstream | 82528 | 28693411 ~ 28693653 (+) | True | G29240 |
| LOC110532150 | mRNA | upstream | 862 | 28530845 ~ 28534305 (+) | True | LOC110532150 |
| XM_021597889.2 | mRNA | upstream | 8965 | 28500843 ~ 28526202 (+) | False | mbtps1 |
| XM_036975151.1 | mRNA | upstream | 8965 | 28501273 ~ 28526202 (+) | True | mbtps1 |
| XM_036975125.1 | mRNA | upstream | 41114 | 28478880 ~ 28494053 (+) | False | pskh1 |
| XM_021597876.2 | mRNA | upstream | 41114 | 28480906 ~ 28494053 (+) | True | pskh1 |
| XM_021597929.1 | mRNA | downstream | 127232 | 28738115 ~ 28742553 (+) | True | pnp6 |
| XM_021597940.2 | mRNA | downstream | 138999 | 28749882 ~ 28763697 (+) | True | LOC110520547 |
| XM_021597949.2 | mRNA | downstream | 159085 | 28769968 ~ 28778739 (+) | True | LOC110520559 |
| XM_021597967.2 | mRNA | downstream | 171014 | 28781897 ~ 28786756 (+) | False | LOC110520570 |
| XM_021597960.2 | mRNA | downstream | 171015 | 28781898 ~ 28786756 (+) | True | LOC110520570 |
| TU32543 | other | upstream | 486805 | 28047626 ~ 28048362 (+) | True | G28416 |
| TU32398 | other | upstream | 680213 | 27853757 ~ 27854954 (+) | True | G28285 |
| TU32393 | other | upstream | 690156 | 27844640 ~ 27845011 (+) | True | G28280 |
| TU31781 | other | upstream | 970015 | 27563381 ~ 27565152 (+) | True | LOC110520258 |
| TU31782 | other | upstream | 972304 | 27562319 ~ 27562863 (+) | False | LOC110520258 |
| TU33696 | other | downstream | 454773 | 29065656 ~ 29067795 (+) | True | LOC110520661 |
| TU34064 | other | downstream | 581846 | 29192729 ~ 29253218 (+) | False | mef2aa |
| TU37662 | other | downstream | 3239590 | 31850473 ~ 31850969 (+) | True | G33249 |
| TU37697 | other | downstream | 3345647 | 31956530 ~ 31961547 (+) | True | G33284 |
| TU38120 | other | downstream | 3839971 | 32450854 ~ 32452385 (+) | True | G33681 |
